Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2012
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12964-12|AAA91216.1| 362|Caenorhabditis elegans Hypothetical p... 35 0.078
AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical ... 33 0.18
AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical ... 33 0.18
Z69885-3|CAA93755.1| 278|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 2.9
Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF098997-12|ABF71720.1| 377|Caenorhabditis elegans Hypothetical... 29 3.9
AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a prot... 29 3.9
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 5.1
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 28 6.8
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 6.8
AF000265-10|AAB52949.2| 335|Caenorhabditis elegans Hypothetical... 28 6.8
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U12964-12|AAA91216.1| 362|Caenorhabditis elegans Hypothetical
protein F26F4.1 protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.078
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 24/196 (12%)
Frame = +1
Query: 112 LDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQGSGA-DL 288
L +L ++Y+A Q YRT R K E R++Q A D+
Sbjct: 6 LSRLSEFEKEKKFYDALQFYRTKVTRSFRLKNANEVAIPLVKHALEFFFREKQYQCAIDI 65
Query: 289 AILFVEVLTKSETKPNEEW-------VSKLAKLFEL---ISSSVPE------RETFLTNS 420
+ E L+K+ EE VSK A E+ +S PE R + +
Sbjct: 66 TTQYAECLSKNNVDLGEEAFNILADSVSKFANFAEIENEAGNSEPEQLLNTARCKCVDLA 125
Query: 421 IKWSMDN------NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANML-IELH 579
I+W+ K G H +A+ A HFL S D ++AN L E
Sbjct: 126 IQWTKQKATTPIEKKYGSAAFHTVLAKKLVAVDHVELAKNHFLLSDDFKSFANFLHQEYE 185
Query: 580 TTKGLKSEIDLFIAQA 627
+ K +SE ++ I +A
Sbjct: 186 SFKQKESEPEVIIVEA 201
>AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical
protein ZC123.4b protein.
Length = 536
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 195 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 317
+SE + RI QR+ G+ STRK S S TLRRS NK
Sbjct: 44 SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84
>AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical
protein ZC123.4a protein.
Length = 534
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 195 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 317
+SE + RI QR+ G+ STRK S S TLRRS NK
Sbjct: 44 SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84
>Z69885-3|CAA93755.1| 278|Caenorhabditis elegans Hypothetical
protein T04C10.3 protein.
Length = 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 298 FVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKI 477
F ++L K E + +L + F+L+ ++ + L +S+K ++ +KK +L KK+
Sbjct: 174 FTDLLQDFFQKRRVEKLRQLVEEFDLVLITMGNIYSQLNDSMKSDLEASKKQKTILDKKL 233
Query: 478 AEVFWKEKK 504
+++ K K
Sbjct: 234 SDLLQKTTK 242
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 653 NVRMATETFLRYTETHPKIK---NSKGPPYIFPLLNF 754
NV MA E R+ + +P ++ N+KGP IFP LNF
Sbjct: 8 NVTMAEED--RWKQWYPNMEMIVNNKGPKLIFPELNF 42
>Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical
protein F10A3.13 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 556 HMLNHPMSVKSVYEQLCTFFPSKILLLFSCVGVG 455
+ L + +++++ L FFP+ L+LF GVG
Sbjct: 249 YQLFKTLLIQTIFPSLLVFFPAACLILFPAFGVG 282
>AF098997-12|ABF71720.1| 377|Caenorhabditis elegans Hypothetical
protein T10D4.1 protein.
Length = 377
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 544 GSAYANMLIELHTTKGLKSEIDLFIAQACVANTL 645
GS ++N L+E T GLKS++ F+ C+ NTL
Sbjct: 118 GSDFSNSLVEEDTVNGLKSKV-FFV--LCLTNTL 148
>AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a protein
protein 21 protein.
Length = 253
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 472 KIAEVFWKEKKYTAAHRHFLHSSDGSAY 555
+I VFW E H +F+HS D S++
Sbjct: 204 EIVRVFWPEYNGNYHHNNFIHSFDSSSF 231
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 653 NVRMATETFLRYTETHPKIK---NSKGPPYIFPLLNF 754
NV+MA E R+ +P ++ N+KGP IFP LNF
Sbjct: 8 NVQMAEED--RWLTQYPNMEMIVNNKGPKPIFPELNF 42
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 509 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 330
+Y F N + LC+ + F+ +I H + R + + + + NSN++ +F ++
Sbjct: 209 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 268
Query: 329 LV 324
+V
Sbjct: 269 IV 270
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 509 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 330
+Y F N + LC+ + F+ +I H + R + + + + NSN++ +F ++
Sbjct: 210 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 269
Query: 329 LV 324
+V
Sbjct: 270 IV 271
>AF000265-10|AAB52949.2| 335|Caenorhabditis elegans Hypothetical
protein C18E3.1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 623 KPVLQILCLRNVRMATETFLRYTETHPKIKNSKGPPYIFPL 745
K V Q LC + ++ FLR E H +++ PP + P+
Sbjct: 72 KAVHQDLCTHDQKILEPLFLRKCEPH-RVRQGTAPPNVIPI 111
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 502 FFPSKILLLFSCVGVGHLFCCYPLTILL 419
+ PS+ LLFS V VG + YP+ +L+
Sbjct: 104 YSPSEKSLLFSLVAVGAMVAVYPVMLLI 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,431,591
Number of Sequences: 27780
Number of extensions: 427067
Number of successful extensions: 1179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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