Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2010
         (802 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003284-1|AAO25042.1|  348|Drosophila melanogaster GM10231p pro...    44   3e-04
AE014296-1341|AAF50507.1|  348|Drosophila melanogaster CG8281-PA...    44   3e-04
BT021429-1|AAX33577.1|  319|Drosophila melanogaster GM05855p pro...    39   0.007
AY119266-1|AAM51126.1|  288|Drosophila melanogaster SD24069p pro...    39   0.007
AE014298-1806|AAF48198.2|  319|Drosophila melanogaster CG4004-PA...    39   0.007
AE014296-124|AAF47403.1|  288|Drosophila melanogaster CG3386-PA ...    39   0.007
AY089346-1|AAL90084.1|  297|Drosophila melanogaster AT16656p pro...    36   0.085
AE014298-2761|AAF48878.1|  324|Drosophila melanogaster CG12609-P...    36   0.085
AE014298-2760|AAN09474.1|  293|Drosophila melanogaster CG12609-P...    36   0.085
AY061296-1|AAL28844.1|  339|Drosophila melanogaster LD20718p pro...    34   0.20 
AE014298-1807|AAF48199.2|  339|Drosophila melanogaster CG4004-PB...    34   0.20 
AY089316-1|AAL90054.1|  411|Drosophila melanogaster AT12489p pro...    34   0.26 
AE014297-2808|AAF55775.2|  411|Drosophila melanogaster CG5180-PA...    34   0.26 
AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    31   1.4  
BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p pro...    31   1.8  
AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisat...    31   1.8  
AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA...    31   1.8  
AY051738-1|AAK93162.1|  410|Drosophila melanogaster LD26477p pro...    30   4.2  
AE014297-4502|AAO41612.1|  410|Drosophila melanogaster CG11504-P...    30   4.2  
AE014297-4501|AAF56985.1|  410|Drosophila melanogaster CG11504-P...    30   4.2  
AE014297-4500|AAN14204.1|  410|Drosophila melanogaster CG11504-P...    30   4.2  

>BT003284-1|AAO25042.1|  348|Drosophila melanogaster GM10231p
           protein.
          Length = 348

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -3

Query: 275 KKNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELK 153
           K+  AY  L+  Y  +   A+ +DVKKK N+LRTN+RKELK
Sbjct: 49  KRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELK 89



 Score = 32.3 bits (70), Expect = 0.79
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 343 IQLYRELPSLWNVKCKEYHDRDKK 272
           IQ YR+LP LW+   ++Y +R+K+
Sbjct: 27  IQTYRDLPVLWDTSLRDYTNREKR 50


>AE014296-1341|AAF50507.1|  348|Drosophila melanogaster CG8281-PA
           protein.
          Length = 348

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -3

Query: 275 KKNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELK 153
           K+  AY  L+  Y  +   A+ +DVKKK N+LRTN+RKELK
Sbjct: 49  KRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELK 89



 Score = 32.3 bits (70), Expect = 0.79
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 343 IQLYRELPSLWNVKCKEYHDRDKK 272
           IQ YR+LP LW+   ++Y +R+K+
Sbjct: 27  IQTYRDLPVLWDTSLRDYTNREKR 50


>BT021429-1|AAX33577.1|  319|Drosophila melanogaster GM05855p
           protein.
          Length = 319

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = -3

Query: 275 KKNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQS 138
           KK   Y+ LL   + + S  S  DVK+K NSLR  +R+E KK  +S
Sbjct: 42  KKEPGYQELLKILRRVNSNCSIQDVKRKINSLRCCYRREFKKVQES 87


>AY119266-1|AAM51126.1|  288|Drosophila melanogaster SD24069p
           protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQSKKYTL 123
           +N AYE L  K +E+   A++ +V ++ N  RTN+R+E  + L+ K+  L
Sbjct: 44  RNRAYELLERKLREIQPNATRTEVGRRINIFRTNYRREQMRILKQKELGL 93


>AE014298-1806|AAF48198.2|  319|Drosophila melanogaster CG4004-PA,
           isoform A protein.
          Length = 319

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = -3

Query: 275 KKNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQS 138
           KK   Y+ LL   + + S  S  DVK+K NSLR  +R+E KK  +S
Sbjct: 42  KKEPGYQELLKILRRVNSNCSIQDVKRKINSLRCCYRREFKKVQES 87


>AE014296-124|AAF47403.1|  288|Drosophila melanogaster CG3386-PA
           protein.
          Length = 288

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQSKKYTL 123
           +N AYE L  K +E+   A++ +V ++ N  RTN+R+E  + L+ K+  L
Sbjct: 44  RNRAYELLERKLREIQPNATRTEVGRRINIFRTNYRREQMRILKQKELGL 93



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = -1

Query: 385 ERIQKLRKEFFCECIQLYRELPSLWNVKCKEYHDRD 278
           +R    +++F+ E + LY+ +P LW+V    Y +++
Sbjct: 7   DRFSAGKRQFWREFLALYQGMPELWDVHHLNYRNKE 42


>AY089346-1|AAL90084.1|  297|Drosophila melanogaster AT16656p
           protein.
          Length = 297

 Score = 35.5 bits (78), Expect = 0.085
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           KEF    + LYRE P LW +    Y D D K++   K
Sbjct: 29  KEFNLRLVDLYREQPCLWKITLPAYKDADMKRSSWEK 65


>AE014298-2761|AAF48878.1|  324|Drosophila melanogaster CG12609-PB,
           isoform B protein.
          Length = 324

 Score = 35.5 bits (78), Expect = 0.085
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           KEF    + LYRE P LW +    Y D D K++   K
Sbjct: 29  KEFNLRLVDLYREQPCLWKITLPAYKDADMKRSSWEK 65


>AE014298-2760|AAN09474.1|  293|Drosophila melanogaster CG12609-PA,
           isoform A protein.
          Length = 293

 Score = 35.5 bits (78), Expect = 0.085
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           KEF    + LYRE P LW +    Y D D K++   K
Sbjct: 29  KEFNLRLVDLYREQPCLWKITLPAYKDADMKRSSWEK 65


>AY061296-1|AAL28844.1|  339|Drosophila melanogaster LD20718p
           protein.
          Length = 339

 Score = 34.3 bits (75), Expect = 0.20
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQS 138
           K  +Y  LL   +   S A+   +K+K N+ RT++R+EL+K L S
Sbjct: 18  KLESYSRLLELLRTTDSYANIHTLKRKINNFRTSYRRELRKVLDS 62


>AE014298-1807|AAF48199.2|  339|Drosophila melanogaster CG4004-PB,
           isoform B protein.
          Length = 339

 Score = 34.3 bits (75), Expect = 0.20
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQS 138
           K  +Y  LL   +   S A+   +K+K N+ RT++R+EL+K L S
Sbjct: 18  KLESYSRLLELLRTTDSYANIHTLKRKINNFRTSYRRELRKVLDS 62


>AY089316-1|AAL90054.1|  411|Drosophila melanogaster AT12489p
           protein.
          Length = 411

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKK 150
           +N +Y+ L+ K KE+     +  V +K NSLR+  R+E +K
Sbjct: 96  RNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRSAFRREFRK 136


>AE014297-2808|AAF55775.2|  411|Drosophila melanogaster CG5180-PA
           protein.
          Length = 411

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -3

Query: 272 KNNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKK 150
           +N +Y+ L+ K KE+     +  V +K NSLR+  R+E +K
Sbjct: 96  RNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRSAFRREFRK 136


>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
           endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -2

Query: 711 VTDKLFSAIINSRISPIIEARQSVE--QAGFRKGFSTID 601
           +  KLF  I+ +RI  I E+   ++  Q GFRKG ST+D
Sbjct: 487 IVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLD 525


>BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 581 PPKVYLWSIVEKPFRKPACSTDCLASIMGLIL 676
           PP+   WS+ E  FR P    +C++  MGLIL
Sbjct: 319 PPR---WSVQEHTFRPPYYHRNCMSEFMGLIL 347


>AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisate
           1,2-dioxygenase protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 581 PPKVYLWSIVEKPFRKPACSTDCLASIMGLIL 676
           PP+   WS+ E  FR P    +C++  MGLIL
Sbjct: 308 PPR---WSVQEHTFRPPYYHRNCMSEFMGLIL 336


>AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 581 PPKVYLWSIVEKPFRKPACSTDCLASIMGLIL 676
           PP+   WS+ E  FR P    +C++  MGLIL
Sbjct: 319 PPR---WSVQEHTFRPPYYHRNCMSEFMGLIL 347


>AY051738-1|AAK93162.1|  410|Drosophila melanogaster LD26477p
           protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           +E   + I  YR    LW++ C EY  +D K+ +L +
Sbjct: 5   REKTLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNE 41


>AE014297-4502|AAO41612.1|  410|Drosophila melanogaster CG11504-PC,
           isoform C protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           +E   + I  YR    LW++ C EY  +D K+ +L +
Sbjct: 5   REKTLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNE 41


>AE014297-4501|AAF56985.1|  410|Drosophila melanogaster CG11504-PB,
           isoform B protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           +E   + I  YR    LW++ C EY  +D K+ +L +
Sbjct: 5   REKTLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNE 41


>AE014297-4500|AAN14204.1|  410|Drosophila melanogaster CG11504-PA,
           isoform A protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 364 KEFFCECIQLYRELPSLWNVKCKEYHDRDKKKTMLTK 254
           +E   + I  YR    LW++ C EY  +D K+ +L +
Sbjct: 5   REKTLQLISEYRSRRGLWDMTCDEYRKKDVKQRLLNE 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,439,200
Number of Sequences: 53049
Number of extensions: 762070
Number of successful extensions: 2451
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)