Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2010
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 40 0.003
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 40 0.003
Z30662-11|CAE17937.1| 358|Caenorhabditis elegans Hypothetical p... 29 3.9
Z30317-8|CAE17925.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical... 29 3.9
AF068720-9|AAM15584.1| 209|Caenorhabditis elegans Hypothetical ... 28 6.8
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical pr... 28 8.9
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 28 8.9
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF130407-1|AAD42308.1| 632|Caenorhabditis elegans phophoinositi... 28 8.9
AF130406-1|AAD42307.1| 636|Caenorhabditis elegans phophoinositi... 28 8.9
AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class pro... 28 8.9
AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class pro... 28 8.9
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -2
Query: 702 KLFSAIINSRISPIIEARQSVEQAGFRKGFSTIDH 598
K+F+ + +R+ ++ Q VEQAGFR+ FSTIDH
Sbjct: 463 KVFTKCLLNRMRRSLDEAQPVEQAGFRRSFSTIDH 497
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -2
Query: 702 KLFSAIINSRISPIIEARQSVEQAGFRKGFSTIDH 598
K+F+ + +R+ ++ Q VEQAGFR+ FSTIDH
Sbjct: 634 KVFTKCLLNRMRRSLDEAQPVEQAGFRRSFSTIDH 668
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -2
Query: 702 KLFSAIINSRISPIIEARQSVEQAGFRKGFSTIDH 598
K+F+ + +R+ ++ Q VEQAGFR+ FSTIDH
Sbjct: 373 KVFTKCLLNRMRRSLDEAQPVEQAGFRRSFSTIDH 407
>Z30662-11|CAE17937.1| 358|Caenorhabditis elegans Hypothetical
protein T16G12.9 protein.
Length = 358
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 269 NNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQSK 135
N L SKY D VKK F++ + H +E K L ++
Sbjct: 248 NQITSKLNSKYGAQLGDLLNDQVKKAFSNYKRRHYEEFKHELNNE 292
>Z30317-8|CAE17925.1| 358|Caenorhabditis elegans Hypothetical
protein T16G12.9 protein.
Length = 358
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 269 NNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKKHLQSK 135
N L SKY D VKK F++ + H +E K L ++
Sbjct: 248 NQITSKLNSKYGAQLGDLLNDQVKKAFSNYKRRHYEEFKHELNNE 292
>AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical
protein Y116A8C.26a protein.
Length = 917
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -3
Query: 356 FLRMYPIVQRIAVSVECQMQRIS*P**KKNNAYETLLSKYKEMFSQ 219
++ +Y ++ VSVE QM+ +S +++AYET+ K M+ Q
Sbjct: 402 YIDLYLAIEGFKVSVEHQMRSLSKGELSESDAYETVKEAAKYMYDQ 447
>AF068720-9|AAM15584.1| 209|Caenorhabditis elegans Hypothetical
protein K02H11.9 protein.
Length = 209
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 269 NNAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHR 165
N +YE +M++ A + +KKK N + HR
Sbjct: 108 NESYEKSFFIVNDMYATAEIEQMKKKLNKMNVKHR 142
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -1
Query: 784 TPAQWSKSNIIPIYKKEDSKDIGNGDRQAFLCNYKLE----NQSHNRSKTVC 641
T W+K+N+I K KD ++ +C YK + NQ+ S T C
Sbjct: 140 TQMAWAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNYLNQNIYTSGTTC 191
>Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical
protein C27C12.1 protein.
Length = 264
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 739 KEDSKDIGNGDRQAFLCNYKLENQS 665
KE+ + +GNGD FLC K+ + S
Sbjct: 29 KEELETLGNGDESLFLCPQKITHCS 53
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 495 ITPCFSIASCRVSIAQYFSVCGSSSRGVH 409
I PC + +C+ + QYF C S GVH
Sbjct: 409 INPCQNGGTCQDADGQYFCHCTSGFGGVH 437
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 266 NAYETLLSKYKEMFSQASKDDVKKKFNSLRTNHRKELKK-HLQSKKY 129
N Y L SK + F + K+++ ++ N L KEL +Q K Y
Sbjct: 661 NTYGLLKSKCRYFFINSMKEEINEEMNRLSNEINKELDNLKIQWKNY 707
>AF130407-1|AAD42308.1| 632|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1b protein.
Length = 632
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 63 PFHSF*SQSLVSKTGR*HCHQGIFLRLEVFL 155
PFH F + SL+ K G +G+F R +FL
Sbjct: 466 PFHIFTNNSLILKQGYLEKKRGLFARRRMFL 496
>AF130406-1|AAD42307.1| 636|Caenorhabditis elegans
phophoinositide-dependent proteinkinase 1a protein.
Length = 636
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 63 PFHSF*SQSLVSKTGR*HCHQGIFLRLEVFL 155
PFH F + SL+ K G +G+F R +FL
Sbjct: 470 PFHIFTNNSLILKQGYLEKKRGLFARRRMFL 500
>AF026207-4|AAK82904.1| 632|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform a protein.
Length = 632
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 63 PFHSF*SQSLVSKTGR*HCHQGIFLRLEVFL 155
PFH F + SL+ K G +G+F R +FL
Sbjct: 466 PFHIFTNNSLILKQGYLEKKRGLFARRRMFL 496
>AF026207-3|AAK82905.1| 636|Caenorhabditis elegans Pdk-class
protein kinase protein1, isoform b protein.
Length = 636
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 63 PFHSF*SQSLVSKTGR*HCHQGIFLRLEVFL 155
PFH F + SL+ K G +G+F R +FL
Sbjct: 470 PFHIFTNNSLILKQGYLEKKRGLFARRRMFL 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,330,432
Number of Sequences: 27780
Number of extensions: 422390
Number of successful extensions: 1547
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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