Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2008
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.1  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 66  RYINDHVFKLLEETFKTQRLDYNC 137
           + +   ++K+LEE +KT    Y C
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTC 233


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +3

Query: 489 FVVNLTVGNGLCFIIQHFYKPI*NCINVMKNVFIIYELLLLIS 617
           ++V LT  + L FI+   +  +    N ++ ++  +   LLI+
Sbjct: 287 YIVLLTFASDLLFILIQLFNSLRRMRNDLERLYFYWSFALLIT 329


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 665 MIHFLFYFDIIFNMIH*Y 612
           + H+L  F  +FN++H Y
Sbjct: 522 LAHYLRVFFTVFNVVHCY 539


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 342 FILQTCTDGRIVDYICVKPVCIYTNLFY 259
           FI     D   + Y C+   C+ T +FY
Sbjct: 371 FISDFDCDINSIQYFCLMARCLNTLIFY 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,988
Number of Sequences: 336
Number of extensions: 3862
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)