Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2008
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 36 0.027
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 34 0.14
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 34 0.14
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 32 0.44
SB_31886| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 31 1.0
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 31 1.0
SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 31 1.0
SB_6367| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.84) 31 1.3
SB_21753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14) 30 2.3
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 30 2.3
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 30 2.3
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 3.1
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 29 3.1
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41) 29 5.4
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 7.2
SB_27204| Best HMM Match : RVT_1 (HMM E-Value=0.00085) 28 9.5
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 28 9.5
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 9 QINIEDIEKKNFEEFEKSLR----YINDHVFKLLEE--TFKTQRLDYNCGTGRSHDEELK 170
++ + +IE + +EE + L+ Y N + + EE T K + R +D+ +
Sbjct: 3651 KVELIEIENRKWEEERRKLKEEANYANKELRSIQEELRTLKREMKSLKADASRKNDKTAE 3710
Query: 171 LLIDKNKQLRQEVDNKTNEILILQTKY 251
L +N ++RQE D+ NE++ L+ K+
Sbjct: 3711 LT-HENDKIRQEKDDIANELMNLKEKF 3736
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 INIEDIE-KKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKN 188
+N +++E +K E+ E L+ + KL E+ T + DY G H EEL+ + ++
Sbjct: 95 LNEKEVELRKTIEQKEHLLQMAEKEIVKLREQL--TSKADY----GNIHAEELQRIRNEL 148
Query: 189 KQLRQEVDNKTNEILILQTKYENYKK 266
++ + E+ + +++ K + YKK
Sbjct: 149 EKCKNEISDLNSKLNTKSQKLKTYKK 174
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 INIEDIE-KKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKN 188
+N +++E +K E+ E L+ + KL E+ T + DY G H EEL+ + ++
Sbjct: 95 LNEKEVELRKTIEQKEHLLQMAEKEIVKLREQL--TSKADY----GNIHAEELQRIRNEL 148
Query: 189 KQLRQEVDNKTNEILILQTKYENYKK 266
++ + E+ + +++ K + YKK
Sbjct: 149 EKCKNEISDLNSKLNTKSQKLKTYKK 174
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 144 GRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYE 254
G D+ ++ L +KN +L Q V N NEI+ L+ K E
Sbjct: 85 GAKKDKTIEDLKNKNSELEQNVQNLNNEIIKLEAKLE 121
>SB_31886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 123 LDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYENYKKGLYKYKQVS 293
L+Y G EE K+L +NK L Q+++ KT+ I + K E ++ K K+ S
Sbjct: 4 LEYGEDEGLGVGEEFKILQAENKHLEQQLEEKTSHIDKCKGKMELEREKQQKLKRES 60
>SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 539
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 123 LDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQT---KYENYKKGLYKYKQVS 293
+D + EEL ID+ + L QEV+ +E++ LQ+ Y+ +K L K ++ S
Sbjct: 317 IDSLLAANKEQQEELARKIDEARSLGQEVNELESELVKLQSAQVSYQLEQKELRKKQRRS 376
Query: 294 HRY 302
RY
Sbjct: 377 ERY 379
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +3
Query: 12 INIEDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNK 191
+ +ED + + + R +++ LE++F+ +R SHD+E+ L +
Sbjct: 997 LRVEDEHEVEIRQLKSDFRERSENERTELEKSFRQERTKMK----NSHDKEMVQLESRED 1052
Query: 192 QLRQEVDNKTNEI 230
QL +E+D K ++
Sbjct: 1053 QLTKEMDTKLKKL 1065
>SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 123 LDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQT---KYENYKKGLYKYKQVS 293
+D + EEL ID+ + L QEV+ +E++ LQ+ Y+ +K L K ++ S
Sbjct: 317 IDSLLAANKEQQEELARKIDEARSLGQEVNELESELVKLQSAQVSYQLEQKELRKKQRRS 376
Query: 294 HRY 302
RY
Sbjct: 377 ERY 379
>SB_6367| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.84)
Length = 563
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 120 RLDYN--CGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYENYKKGLYKYKQVS 293
++DY+ C S ++E L +N +L + V N TN+ LQT N + L +Q+S
Sbjct: 12 QIDYDALCQAHNSLEDENSKLSGQNSELTERVQNLTNDAASLQTSLTNTEDDL---RQIS 68
Query: 294 HRYSPL 311
+ L
Sbjct: 69 SQLEEL 74
>SB_21753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 39 NFEEFEKSLRYINDHVFKLLEETFKTQRL 125
N +FE +L I DHV+KLLEE +R+
Sbjct: 73 NESKFEDNLLVITDHVYKLLEEKAGLKRV 101
>SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14)
Length = 812
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 123 LDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEI 230
L+Y G EE K+L +NK L Q+++ KT+ I
Sbjct: 4 LEYGEDEGLGVGEEFKILQAENKHLEQQLEEKTSHI 39
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +3
Query: 18 IEDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQL 197
++++E+K +FE S + D L+E + QRL G+ + +L+ +N +
Sbjct: 87 MKELERKL--DFEGSFKKRQDMQVTRLKE--QVQRLQDERDDGQLRETKLQ---QENTRY 139
Query: 198 RQEVDNKTNEILILQTKYENYKKGLYKYKQVSHRYSPLFCH--QYR 329
+++ E+ L+ + E+ +K + HR+ FCH QYR
Sbjct: 140 ERQMREMREEMSALEKREEDMRKRKSEVGNHQHRHFEHFCHRQQYR 185
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +3
Query: 150 SHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYENYKKGLYKYKQ 287
S EELKLL+DK L+ EV T L+ Y K L K KQ
Sbjct: 209 SDSEELKLLVDK---LQHEVTTMTQYQETLEKDYTGIKDELTKVKQ 251
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 21 EDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNK-QL 197
E +K EE SLR N+ + + ++E + L + ++EL+ + + +L
Sbjct: 343 EQEQKTRLEELNISLRGDNEAILREVDEMKRALLL------AQEREKELEAICSQEVCRL 396
Query: 198 RQEVDNKTNEILILQTKYENYK 263
+++ +TNE ++L +EN++
Sbjct: 397 EEKLATETNEKMMLSANFENWR 418
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +3
Query: 27 IEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQLRQE 206
I + F+E + +R+ + + K L+E KT LD++ HD E+K L + ++L+QE
Sbjct: 303 IRQNAFQELVE-MRHAYNKLKKQLQE--KTADLDHSQKRVEQHDAEVKKLRARVEELKQE 359
Query: 207 VDNKTNEIL 233
+ +E L
Sbjct: 360 LAKAEDEPL 368
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 45 EEFEKSLRYINDHVFKLLEETFKT-QRLDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKT 221
E+ EK + + + V L +E +T ++L + +EELKL ++ + Q +D K
Sbjct: 1638 EKREKDVAELREKVQSLEKELMETSEKLREDLRGSEKREEELKLKLEAGESNNQAIDKKI 1697
Query: 222 NEI 230
E+
Sbjct: 1698 AEL 1700
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 147 RSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKY 251
R+ LK L +KN L EV++ NE+ +L+ KY
Sbjct: 677 RAQAAGLKALAEKNTSLMWEVESYKNEMELLRDKY 711
>SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41)
Length = 487
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 90 KLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYENYKKG 269
+L T+K L G G H E +L + ++ +R DN N L QT+ +KG
Sbjct: 415 QLWNRTYKLCILSNQHGIGNLHQEITRLFVANSRAVRPLADN--NTALTDQTEIFYDRKG 472
Query: 270 LY 275
L+
Sbjct: 473 LF 474
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +3
Query: 9 QINIEDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEEL----KLL 176
Q + + I +N + E ++ +++ + + + +TQ L + T +S ++L KLL
Sbjct: 1587 QAHEQIINLENRPQLESAISMVSESMVESSGDDMETQILRQDLETLQSKYDKLERQNKLL 1646
Query: 177 IDKNKQLRQEVDNKTNEI 230
D+N QL+Q+++ + ++
Sbjct: 1647 QDQNSQLQQQLNERDRKL 1664
>SB_27204| Best HMM Match : RVT_1 (HMM E-Value=0.00085)
Length = 646
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Frame = +3
Query: 30 EKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTG----------RSHDEELKLLI 179
E NFE E+ +R +ND ++ L +++F + + GT ++ +
Sbjct: 191 EDFNFENPEECVRILNDRLWNLFDQSFPCINVKIHPGTHPISPLVKHLCNIRNKTSRFRS 250
Query: 180 DKNKQLRQEVDNK---TNEILILQTKYENYKKGLYKYKQVSHR 299
+ +RQE NK N+++ +Q + + + +G + V++R
Sbjct: 251 EAKNTIRQERINKLIRMNQVMSVQNESKEHSRGSKGWWDVANR 293
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +3
Query: 150 SHDEELKLLIDKNK----QLRQEVDNKTNEILILQTKYENYKKGLYKYKQVSHRYS 305
S +E+L +L ++ LRQE+ +KTNE+ L+ +EN L +Q S S
Sbjct: 1269 SANEDLDVLCEQRSGEIDALRQELVDKTNEVEHLRNDFENQTLELKDVQQRSSELS 1324
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +3
Query: 75 NDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYE 254
ND + +EE K R++++ ++ EEL+ + K + + + N T I + + +
Sbjct: 488 NDEELRRVEERLKGYRVEHDVNQKKTLIEELRNKLRKAQSMEDKEAN-TVAIFDVSLRVK 546
Query: 255 NYKKGLYKYKQ 287
++KK L ++Q
Sbjct: 547 HFKKRLSLHQQ 557
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 280 TNRFHTDIVHYSAISTGLKYESAIIQYTSCLKISTPLKSPNTQI 411
TNR H + + G KY ++ + S K + PL++ + +
Sbjct: 2168 TNRIHQSDLLFLPTDRGYKYALTVVDFASRYKAARPLRTKSAAV 2211
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 18 IEDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQL 197
+E++ K+N + + + I D KL E K + D + ++++ +NKQL
Sbjct: 1734 LENLRKRNKQRENELQKQIADLQRKLNEAESKIRTADEKVQDAENERDDME---HRNKQL 1790
Query: 198 RQEVDNKTNEILILQTK 248
R +V N + I L+ K
Sbjct: 1791 RDDVVNFQSRITELEHK 1807
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,975,418
Number of Sequences: 59808
Number of extensions: 406350
Number of successful extensions: 1097
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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