Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2007
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    28   0.094
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    28   0.094
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.2  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 83  SKFMKDYAMLKIYESCFGSNLLKQITKELRDAYSKCSTTPSMKQTQNSLPSYLSNLAPGF 262
           SKF+ D  + K ++      L +  T E   AYS  S++PS    Q+S  S  ++ +P  
Sbjct: 3   SKFIIDSMLPKYHQQFHHQQLFQSATTEAPAAYS--SSSPSGSSPQHSSSS--ASTSPAA 58

Query: 263 AMDPTQSNVKH 295
            M P  S   H
Sbjct: 59  RMYPYVSAAHH 69


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 83  SKFMKDYAMLKIYESCFGSNLLKQITKELRDAYSKCSTTPSMKQTQNSLPSYLSNLAPGF 262
           SKF+ D  + K ++      L +  T E   AYS  S++PS    Q+S  S  ++ +P  
Sbjct: 3   SKFIIDSMLPKYHQQFHHQQLFQSATTEAPAAYS--SSSPSGSSPQHSSSS--ASTSPAA 58

Query: 263 AMDPTQSNVKH 295
            M P  S   H
Sbjct: 59  RMYPYVSAAHH 69


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 451 ELRPGRHHEWRHSGLGEWNPLRSKSEY 371
           EL PG       S L  W+PL +  +Y
Sbjct: 414 ELAPGLVGPLLTSALASWSPLTNPKQY 440


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 FAFRPQGVPFPQPGMSP 424
           + F P G+  P PG+SP
Sbjct: 222 YRFSPTGLIPPHPGLSP 238


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 FAFRPQGVPFPQPGMSP 424
           + F P G+  P PG+SP
Sbjct: 114 YRFSPTGLIPPHPGLSP 130


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 344 LLDWVNHFHHF 312
           LLD +NHF HF
Sbjct: 477 LLDVINHFPHF 487


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 257 GFAMDPTQSNVKHTDGAIQ 313
           G AMD  + N KH  G  Q
Sbjct: 182 GVAMDCLKGNAKHWTGIFQ 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,417
Number of Sequences: 336
Number of extensions: 3064
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)