Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2007
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003472-1|AAO39475.1|  917|Drosophila melanogaster RE68558p pro...    29   5.3  
AE014135-43|AAF59360.3|  917|Drosophila melanogaster CG31999-PA ...    29   5.3  
AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p pro...    29   7.0  
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P...    29   7.0  

>BT003472-1|AAO39475.1|  917|Drosophila melanogaster RE68558p
           protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 203 SMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDLPNQ 340
           S ++  N++ SY  N  PGF +D T +     +    N+ N LP Q
Sbjct: 344 SNQECVNTVGSYSCNCLPGFNLDATLNKCVDINECSINNHNCLPTQ 389


>AE014135-43|AAF59360.3|  917|Drosophila melanogaster CG31999-PA
           protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 203 SMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDLPNQ 340
           S ++  N++ SY  N  PGF +D T +     +    N+ N LP Q
Sbjct: 344 SNQECVNTVGSYSCNCLPGFNLDATLNKCVDINECSINNHNCLPTQ 389


>AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p protein.
          Length = 1379

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 365  GGIFAFRPQG-VPFPQPGMSPFMMPAGPQFRP 457
            GG F  RP G +P P P   P   P GP F P
Sbjct: 1103 GGPF-IRPNGPLPGPGPNFGPHFRPNGPNFGP 1133


>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
            protein.
          Length = 1884

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 365  GGIFAFRPQG-VPFPQPGMSPFMMPAGPQFRP 457
            GG F  RP G +P P P   P   P GP F P
Sbjct: 1103 GGPF-IRPNGPLPGPGPNFGPHFRPNGPNFGP 1133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,622,062
Number of Sequences: 53049
Number of extensions: 614149
Number of successful extensions: 2346
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)