Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2006
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 71 1e-11
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 59 5e-08
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 53 3e-06
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 51 9e-06
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 49 5e-05
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 43 0.003
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 41 0.013
UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum dem... 41 0.013
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 41 0.013
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 41 0.013
UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whol... 39 0.054
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 36 0.38
UniRef50_Q0LMV5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.87
UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to endonuclea... 34 1.2
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 33 2.0
UniRef50_Q4QGC7 Cluster: Putative uncharacterized protein; n=3; ... 33 2.0
UniRef50_A7Q0K1 Cluster: Chromosome chr7 scaffold_42, whole geno... 33 3.5
UniRef50_Q6FWQ6 Cluster: Similar to sp|P38966 Saccharomyces cere... 33 3.5
UniRef50_Q7XT79 Cluster: OSJNBa0029H02.10 protein; n=1; Oryza sa... 32 4.7
UniRef50_A2XV68 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_O01808 Cluster: Putative uncharacterized protein; n=4; ... 32 4.7
UniRef50_A5ADR3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q8TNR6 Cluster: Predicted protein; n=1; Methanosarcina ... 32 6.2
UniRef50_Q09267 Cluster: Uncharacterized protein C32D5.7; n=2; C... 32 6.2
UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to endonuclea... 31 8.1
UniRef50_A4RZD5 Cluster: Gamma-glutamate cysteine synthase; n=1;... 31 8.1
UniRef50_P06529 Cluster: Type II restriction enzyme BsuRI; n=1; ... 31 8.1
UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus ... 31 8.1
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 70.5 bits (165), Expect = 1e-11
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 VAPVTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYR-GKGRPKKKWMNCVKDDMGK 177
VA V KLR ARL W+GHV R + + +R M VEG R G+GRPKK W ++ D+
Sbjct: 610 VASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAM 669
Query: 178 RVVSEEMVYDRRVWKEK 228
++E+M DR+ W+ +
Sbjct: 670 LHITEDMTLDRKEWRSR 686
>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
Papilionoideae|Rep: Reverse transcriptase family member
- Glycine max (Soybean)
Length = 377
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 VAPVTKKLRSARLVWYGHVMRGNENEVGKRMLTMNV-EGYRGKGRPKKKWMNCVKDDMGK 177
VAP+ +K+ RL W+GHV R + V +R+ M + RG+GRPKK +K D+
Sbjct: 294 VAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIREVIKKDLEI 353
Query: 178 RVVSEEMVYDRRVWKEKTCCADP 246
+ MV DR +W++ ADP
Sbjct: 354 NGLDRSMVLDRTLWRKLIHVADP 376
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 10 VTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVV- 186
+ ++ + RL ++GH+ R N +L N+ G R +GRP K+W +C+K D R V
Sbjct: 851 IIDRVATKRLRYFGHINRMNSKRYPHILLNGNIHGKRPRGRPAKRWTDCIKADCKNRQVD 910
Query: 187 ----SEEMVYDRRVWK 222
+ + DR+VW+
Sbjct: 911 SLTKATRLTEDRKVWQ 926
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 51.2 bits (117), Expect = 9e-06
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 19 KLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVV-SEE 195
K+ +L ++GH++RG+ + + +++ VEG R +GR +K+W + +K+ G ++
Sbjct: 326 KVARLKLGYFGHILRGSGSPLAAQIIESQVEGKRKRGRQRKQWFDNIKEWTGLTYTEAKR 385
Query: 196 MVYDRRVWKEKT-CCAD 243
+ DR W++ T CAD
Sbjct: 386 LAQDRNNWRKTTRRCAD 402
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 48.8 bits (111), Expect = 5e-05
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +1
Query: 10 VTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVV- 186
V K+ + R+ ++GHV+R K + V G R +GRP K+W++C+ +D R +
Sbjct: 938 VMDKVSTKRIKYFGHVLRMKPTRYPKIAVEGKVTGNRPRGRPPKRWLDCISEDCKARSIP 997
Query: 187 ----SEEMVYDRRVW 219
+ + DR+ W
Sbjct: 998 RLTDASRLAADRKTW 1012
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 VTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMG-KRVV 186
+ +++ L W+GHV+R + + + + G R +GRP K+W + V+ D+G
Sbjct: 438 ICEEITKRCLKWFGHVLRMPHHRLPYQAFQNDFNGRRPRGRPPKRWKDQVQYDVGLSTQE 497
Query: 187 SEEMVYDRRVW 219
+E+ DR W
Sbjct: 498 AEQRAQDRSDW 508
>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 1096
Score = 40.7 bits (91), Expect = 0.013
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +1
Query: 91 MLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVV-----SEEMVYDRRVWK 222
+L NV G +GRP K+W +C+K D R V + + DR+VW+
Sbjct: 17 LLNENVHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWR 65
>UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum
demissum|Rep: Polyprotein, putative - Solanum demissum
(Wild potato)
Length = 115
Score = 40.7 bits (91), Expect = 0.013
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 4 APVTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEG-YRGKGRPKKKW 147
A + K R ARL W+GHVMR + +R ++V G RG GR K W
Sbjct: 64 ASIVDKTRKARLRWFGHVMRRSTEAPVRRCERLDVVGKRRGSGRLKNYW 112
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 40.7 bits (91), Expect = 0.013
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 34 RLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVVS-EEMVYDR 210
+L ++GH+MR + + K ++ +EG R +GR + +W++ + + M + E+V DR
Sbjct: 258 KLQYFGHLMR-RADSLEKTLMLGKIEGRRRRGRQRMRWLDGIINSMDMGLGGLRELVMDR 316
Query: 211 RVWKEKTC 234
W C
Sbjct: 317 ETWCAVVC 324
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 40.7 bits (91), Expect = 0.013
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 7 PVTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVV 186
P +++R R W H +R + N V ++ LT N E R +GRPK ++ DM +
Sbjct: 902 PAEEEIRKKRWKWIWHTLRKSPNCVTRQALTWNPERQRRRGRPKNTLRREIETDMRRMNK 961
Query: 187 S----EEMVYDRRVWKE 225
+ E+ DR W++
Sbjct: 962 NWKELEKKAQDRVGWRK 978
>UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14527,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 52
Score = 38.7 bits (86), Expect = 0.054
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 61 RGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDM 171
RG + G+RML + + G R +GR K+++M+ VK+DM
Sbjct: 3 RGEMEKDGRRMLRLELPGRRPRGRTKRRFMDVVKEDM 39
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 35.9 bits (79), Expect = 0.38
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 19 KLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDD 168
K+ RL ++GH+M+ N E + V G R +GR + +W++ +K D
Sbjct: 185 KITKQRLSFFGHIMQTNSMETAFTLGA--VSGSRRRGRQRTRWLDTIKTD 232
>UniRef50_Q0LMV5 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 358
Score = 34.7 bits (76), Expect = 0.87
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -2
Query: 285 LFIIILLPFSQSLGVGTTCFLLPYSSIIYHFFAHYP--LTHIVFH 157
L+I++ +PF +LG+ FLL I+Y +FA+ TH +F+
Sbjct: 86 LYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQSPGFTHKLFN 130
>UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1253
Score = 34.3 bits (75), Expect = 1.2
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 10 VTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGK---GRPKKKWMNCVKDDMGKR 180
V++K+R RL + GH R N NE ++L + + GK GRP + + +K D G
Sbjct: 1170 VSEKIRERRLRFAGHSCR-NINEPISQLLLSDWKPKHGKKKPGRPYLTYTDLLKKDTGLE 1228
Query: 181 VVS-EEMVYDRRVWKEKTCCA-DP 246
+ + + DR VW T A DP
Sbjct: 1229 LSEIKAAMLDRNVWMAITARAVDP 1252
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 33.5 bits (73), Expect = 2.0
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 43 WYGHVMRGNENEVGKRMLTMN-VEGYRGKGRPKKKWMNCVKDDMGKRVVSEEMVYDRRVW 219
W GH+ R N+N + EG R +GR +K+W + ++ G+ ++ + +R +W
Sbjct: 364 WAGHISRRNDNRWSSAITHWTPYEGKRNRGRQRKRWRDELQQFWGQTNWHQQAL-NRGIW 422
>UniRef50_Q4QGC7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1753
Score = 33.5 bits (73), Expect = 2.0
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 231 CFLLPYSSIIYHFFA--HYPLTHIVFHTIHPFLLR 133
C L+PY SI +H H + H+V HT++ ++LR
Sbjct: 1580 CSLIPYPSIFHHVDGSWHSYMWHLVVHTVYRYILR 1614
>UniRef50_A7Q0K1 Cluster: Chromosome chr7 scaffold_42, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 376
Score = 32.7 bits (71), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 22 LRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWM 150
LR+A W+ +RG + EV +R L GR KKW+
Sbjct: 179 LRNAAFEWHEEPVRGEQEEVNERALDSEELESSSSGRNSKKWV 221
>UniRef50_Q6FWQ6 Cluster: Similar to sp|P38966 Saccharomyces
cerevisiae YDR089w; n=1; Candida glabrata|Rep: Similar
to sp|P38966 Saccharomyces cerevisiae YDR089w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 831
Score = 32.7 bits (71), Expect = 3.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 291 ESLFIIILLPFSQSLGVGTTCFLLPYSSIIYHFFAHYPLTHIVF 160
++L I ++L SLG+ T C LL +S Y HY L+ +F
Sbjct: 772 KTLIITVILSLGISLGLITLCLLLLFSRYTYAPIWHYALSFAIF 815
>UniRef50_Q7XT79 Cluster: OSJNBa0029H02.10 protein; n=1; Oryza
sativa|Rep: OSJNBa0029H02.10 protein - Oryza sativa
(Rice)
Length = 187
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 133 PKKKWMNCVKDDMGKRVVSEE-MVYDRRVWKE 225
PKKK+ CV+D+ G + ++E+ MV +W+E
Sbjct: 19 PKKKFRFCVRDEYGTKALAEQVMVKSTSLWRE 50
>UniRef50_A2XV68 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 127
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 133 PKKKWMNCVKDDMGKRVVSEE-MVYDRRVWKE 225
PKKK+ CV+D+ G + ++E+ MV +W+E
Sbjct: 19 PKKKFRFCVRDEYGTKALAEQVMVKSTSLWRE 50
>UniRef50_O01808 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 2712
Score = 32.3 bits (70), Expect = 4.7
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 91 MLTMNVEGYRGKGR-----PKKKWMNCVKDDMGKRVVSEEMVYDRRVWKEKTCCADP 246
+LT NV+ G R +K + VK +G++++ + + +R + +TCCADP
Sbjct: 2057 LLTTNVDSSSGSSRFLLCYLRKIFERIVKIPIGRKILVQRRMVERMMSVIRTCCADP 2113
>UniRef50_A5ADR3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 214
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 79 VGKRMLTMNVEGYRGKGRPKKKWMNC----VKDDMGKRVVSEEMVYDRRVWKEKTCCADP 246
VG ++ E + +G+PKKKW +C +KD + + Y + W+ + + P
Sbjct: 110 VGDKLTPAQFESHSVRGQPKKKWQSCIWVLIKDKKVPLCKTALLKYYKETWEGENGRSRP 169
Query: 247 K 249
K
Sbjct: 170 K 170
>UniRef50_Q8TNR6 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 73
Score = 31.9 bits (69), Expect = 6.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 272 MMMNNDSFCGFLPIVVFLCF-SLTYTEYSYLFNIFSVRRL 388
+ M+N F ++ FLCF SLT Y+Y FN++ +L
Sbjct: 31 LKMSNIKSLPFFLVLTFLCFPSLTLIFYTYFFNLYRSEKL 70
>UniRef50_Q09267 Cluster: Uncharacterized protein C32D5.7; n=2;
Caenorhabditis|Rep: Uncharacterized protein C32D5.7 -
Caenorhabditis elegans
Length = 435
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 279 IIILLPFSQSLG-VGTTCFLLPYSSIIYHFFAHYPLTHIVFHT-IHPFLLR 133
I ++ SLG V +T FL + +++ +F +PLT +++H +H F R
Sbjct: 276 IFYMVGIQDSLGDVVSTIFLYVFDAVVILYFIAFPLTTVIYHPYVHCFRRR 326
>UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 890
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 VAPVTKKLRSARLVWYGHVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDD--MG 174
+ P++ +LR RL GH R + + + G R +GRP +++ ++ D +
Sbjct: 820 ITPISARLRDRRLRLSGHCWRSKIEIISQMLFWEPSRGKRTRGRPASTYIDQLEKDTCLP 879
Query: 175 KRVVSEEMVYD 207
++ + ++ ++D
Sbjct: 880 RQELPQKRIFD 890
>UniRef50_A4RZD5 Cluster: Gamma-glutamate cysteine synthase; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Gamma-glutamate
cysteine synthase - Ostreococcus lucimarinus CCE9901
Length = 484
Score = 31.5 bits (68), Expect = 8.1
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 64 GNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKD--DMGKRVVSEEMVYDRRVW 219
G N++ K+M+ ++V+G + +G ++ ++ ++D D GK V + + R W
Sbjct: 410 GTANDIAKKMVELSVQGLQERGLGEEVYLRYLQDIVDDGKSVAARMSEMNAREW 463
>UniRef50_P06529 Cluster: Type II restriction enzyme BsuRI; n=1;
Bacillus subtilis|Rep: Type II restriction enzyme BsuRI
- Bacillus subtilis
Length = 576
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 402 MNLRTSRRTEKILNK*EYSV*VKLKHKNTTIGK 304
+NL+T RR EK+LNK EY+ K + + IGK
Sbjct: 283 VNLKTMRRMEKLLNKHEYA---KTSNNSNAIGK 312
>UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus
iheyensis|Rep: CCA-adding enzyme - Oceanobacillus
iheyensis
Length = 400
Score = 31.5 bits (68), Expect = 8.1
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 130 RPKKKWMNCVKDDMGKRVVSEEMVYDRRVWKEKTCCADP 246
RPK KW+ + +++ VVS+++ ++++ KE C P
Sbjct: 359 RPKGKWIKILLEEVEYLVVSKQLPNEKKIIKEWVLCNQP 397
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,953,475
Number of Sequences: 1657284
Number of extensions: 8398251
Number of successful extensions: 22694
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22687
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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