Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2006
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    20   9.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   9.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   9.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   9.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   9.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -1

Query: 256 PVTWGRHNMFSPSILFYHIPFLRSLPSYPYRLSHNSSISS*VYLFLYIL 110
           P  W R N    + L Y    L++  S+   L  N S+   VY+ LYIL
Sbjct: 104 PAKWIRLN----NNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 299 GFLPIVVFLCFSLTYTEYSYLFNI-FSVRRLVL 394
           G L  +VF C++L    Y Y  +I F+V  L L
Sbjct: 41  GILDSLVFKCYNLRRIYYFYCVSITFNVHLLFL 73


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -1

Query: 256 PVTWGRHNMFSPSILFYHIPFLRSLPSYPYRLSHNSSISS*VYLFLYIL 110
           P  W R N    + L Y    L++  S+   L  N S+   VY+ LYIL
Sbjct: 104 PAKWIRLN----NNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 191 KKWYMIEEYGRRKHVVPTPSD 253
           + +YM E  G RKH +P PS+
Sbjct: 932 RMYYMCE--GERKHHMPCPSN 950


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 264 PFSQSLGVGTTCFLLPYSSIIYHFFAHYPLTH 169
           P+   +   T C + P  +  YHF  H   TH
Sbjct: 144 PYMDGVPFVTQCPIHPGMTFRYHFNVHNSGTH 175


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = -1

Query: 181 PSYPYRLSHNSSISS*VYLFLYILPHS*LTFSYRPHFHFLSSHVHT 44
           P  P+  + ++ +S   ++ L    +  L  SY+ HF+  + + HT
Sbjct: 9   PPTPHESNTSTPVSKSAFIELQQHGYGPLRTSYQHHFNSPAGNAHT 54


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 292 VLRFLAYCCIFVF 330
           VL F ++CCI  F
Sbjct: 9   VLFFFSFCCILFF 21


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 DMGKRVVSEEMVYDRRVWKEKTCCADP 246
           +M K+V+       +++WKE T   DP
Sbjct: 79  EMTKKVIHFLSHNKQQMWKELTAKYDP 105


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 336 KLKHKNTTIGKK 301
           ++KHK  T+GK+
Sbjct: 56  RMKHKRQTLGKQ 67


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 311 IVVFLCFSLTYTEYS 355
           I+ F C S+ YT  S
Sbjct: 170 ILAFACISIAYTNVS 184


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = -2

Query: 255 QSLGVGTTCFLLPYSSIIYHFFAHYPLTHI 166
           Q     T C    YSS   H   H P+ ++
Sbjct: 140 QGFSSSTWCNYSAYSSASRHHVDHQPVPYL 169


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 336 KLKHKNTTIGKK 301
           ++KHK  T+GK+
Sbjct: 4   RMKHKRQTLGKQ 15


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 336 KLKHKNTTIGKK 301
           ++KHK  T+GK+
Sbjct: 187 RMKHKRQTLGKQ 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,777
Number of Sequences: 336
Number of extensions: 2444
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)