Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2006
         (439 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.17 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   0.89 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   2.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   2.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   3.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   3.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   3.6  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   4.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.17
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 235 NMFSPSILFYHIPFLRSLPSYP-YRLSHNSSISS*VY 128
           N+F+P+ L YH P +   P Y   R SH+S+    +Y
Sbjct: 380 NLFNPAALAYHDPAIYLDPRYQMLRASHHSAAGHPLY 416


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 0.89
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +1

Query: 145 WMNCVKDDMGKRVVSEEMVYDRRVWKEKTCCADPK*LGEGQEND 276
           W+   +D + K VV E     +  W  +    DP  +GE +  D
Sbjct: 255 WLRIAQDRVMKSVVKEHTKNCQHTWHHRLEHRDPAVIGEMKRRD 298


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -1

Query: 271 SPALLPVTWGRHNMFSP--SILFYHIPFLRSLPSYPYRLSHNSS 146
           SP L PV   RH+ F+P  S+L +H     + P+ P+ ++++++
Sbjct: 146 SPVLPPVLVPRHSEFAPGHSLLPFH---QMNEPNMPHNVNYSNT 186


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 52   HVMRGNENEVGKRMLTMNVEGYRGKGRPKKKWMNCVKDDMGKRVVSEEMVYDRRVWKEKT 231
            HV R  + +  +R L    E  R + + ++       ++M +R   EEM+  R+ +KEKT
Sbjct: 826  HVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEM-RRKAHEEMLLKRQEYKEKT 884


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 225 LLPYSSIIYHFFAHYPLTHIVFHT 154
           LLPY   + H   H  L H  +HT
Sbjct: 171 LLPYPQHVLHPAHHPALLHPAYHT 194


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 225 LLPYSSIIYHFFAHYPLTHIVFHT 154
           LLPY   + H   H  L H  +HT
Sbjct: 171 LLPYPQHVLHPAHHPALLHPAYHT 194


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 307 QETAKRIIIHHHSPALLPVTWGRHNMFSPSILFY 206
           Q+T   I   HH P L  +  G H++ S   L Y
Sbjct: 695 QKTGFMIFCTHHVPQLAELQAGGHSIQSTETLKY 728


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +1

Query: 19  KLRSARLVWYGHVMRGNENEVGKRMLTMNVEGY--RGKGRPKKKWMNCVKD 165
           KLR   L W   V       +G  +LTM V  Y  R K R +   +  +K+
Sbjct: 568 KLREEHLFWRAFVYITKPAIIGGVLLTMGVATYYLRAKSRAQIAKVKLLKE 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,553
Number of Sequences: 2352
Number of extensions: 8286
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)