Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2001
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    68   1e-11
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    65   8e-11

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = +3

Query: 162 PIGFPDTPNRITVA---VGDRFGDDDSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 323
           P+  P  P  +  +   V +  G    T P   RLPI+A GD + ++RL +LPVD+QPFW
Sbjct: 82  PLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFW 141

Query: 324 FINWQALEAHRKNPQTHV 377
            +N+QA+EA R NP+ +V
Sbjct: 142 LVNYQAIEAMRNNPRPNV 159


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 26/45 (57%), Positives = 39/45 (86%)
 Frame = +3

Query: 243 RLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHV 377
           +LPI+A+GD E ++ LS+LPV++QPFWFIN+QA+EAHR + + +V
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHRNSSRPNV 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,624,637
Number of Sequences: 53049
Number of extensions: 628325
Number of successful extensions: 1595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)