Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2000
(813 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 88 3e-16
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 86 1e-15
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 76 9e-13
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 72 2e-11
UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n... 68 3e-10
UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse tr... 65 2e-09
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 61 4e-08
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 58 3e-07
UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n... 51 4e-05
UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos taur... 47 6e-04
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 46 0.001
UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse tr... 46 0.002
UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse tr... 40 0.056
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 40 0.056
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 40 0.075
UniRef50_UPI0000F34067 Cluster: UPI0000F34067 related cluster; n... 40 0.099
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 39 0.17
UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to endonuclea... 36 1.2
UniRef50_UPI0000EBE766 Cluster: PREDICTED: similar to Uncharacte... 35 2.8
UniRef50_Q5ALW4 Cluster: Putative uncharacterized protein SMP2; ... 35 2.8
UniRef50_Q3LW96 Cluster: T-complex protein eta SU; n=1; Bigelowi... 34 4.9
UniRef50_O49367 Cluster: Putative uncharacterized protein F10M6.... 33 6.5
UniRef50_A4NNK4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A7S326 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.6
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 87.8 bits (208), Expect = 3e-16
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FE+WCWRR+LR+PWTA+R+ S+L ++ L L+ ++YFGH+ RR D+LE+
Sbjct: 218 FELWCWRRLLRVPWTARRSTQSILKEI--SPGCSLEGLMLKLKLQYFGHLMRR-ADSLEK 274
Query: 599 LMVTGKVEGKRPRGRSLKRWSDQI 528
++ GK+EG+R RGR RW D I
Sbjct: 275 TLMLGKIEGRRRRGRQRMRWLDGI 298
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/96 (41%), Positives = 62/96 (64%)
Frame = -2
Query: 812 HKSS*PKQS*CFEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGH 633
HK + +++ FE+WCWRR+LR+PWTA R+N S+L ++ L L+ ++YFGH
Sbjct: 129 HKKAECRKTDVFELWCWRRLLRVPWTAGRSNQSILKEI--SPGISLEGMMLKLKLQYFGH 186
Query: 632 VARRGVDNLERLMVTGKVEGKRPRGRSLKRWSDQIS 525
R D+LE+ ++ GK+EGKR RG+ +W D I+
Sbjct: 187 ---RRADSLEKTLMLGKIEGKRRRGQKRMKWLDGIT 219
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 76.2 bits (179), Expect = 9e-13
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = -2
Query: 776 EMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERL 597
EMW WR++L+I W +RTN+SVL +L E + L + + YFGH+ R L
Sbjct: 292 EMWFWRKMLKISWKDKRTNLSVLQELNTE--RDLLGKVARLKLGYFGHILRGSGSPLAAQ 349
Query: 596 MVTGKVEGKRPRGRSLKRWSDQISEQT 516
++ +VEGKR RGR K+W D I E T
Sbjct: 350 IIESQVEGKRKRGRQRKQWFDNIKEWT 376
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FE+WCWR+++RIPW A+ TN ++L ++K +N L + + +FGH+ + +++E
Sbjct: 150 FELWCWRQMMRIPWAAKITNKTILERVK-QNVS-LEGKITKQRLSFFGHIMQ--TNSMET 205
Query: 599 LMVTGKVEGKRPRGRSLKRWSDQISEQTS 513
G V G R RGR RW D I T+
Sbjct: 206 AFTLGAVSGSRRRGRQRTRWLDTIKTDTN 234
>UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n=9;
Bos taurus|Rep: UPI0000F32779 UniRef100 entry - Bos
Taurus
Length = 263
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/100 (37%), Positives = 62/100 (62%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FE+WCWRR+LR+PWT +R+N S+L ++ L L+ ++YFGH+ + VD+LE+
Sbjct: 144 FELWCWRRLLRVPWTERRSNQSILKEI--SPGISLEEIMLKLKLQYFGHL-MQSVDSLEK 200
Query: 599 LMVTGKVEGKRPRGRSLKRWSDQISEQTSGHLALHYTREL 480
G+ G+ RG + +D+I++ S ++L +REL
Sbjct: 201 -TDAGRYWGQEERGTTEDEMADRITD--SMDVSLSESREL 237
>UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 281
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/74 (37%), Positives = 49/74 (66%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FEMWC+RR+L++ W ++TN+ VL +++ + + ++ + YFGH+ RR + +E+
Sbjct: 208 FEMWCYRRLLQVSWKDKKTNVWVLEKIRTD--LTIKKGIMERKLYYFGHIVRRS-EGIEK 264
Query: 599 LMVTGKVEGKRPRG 558
++ G VEGKR RG
Sbjct: 265 QILQGAVEGKRGRG 278
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FEM C RR++ + + N + QL ME + + +RYFGH+ R
Sbjct: 819 FEMACLRRIMGVTRFDRLRNTHIRTQLNME--ETIIDRVATKRLRYFGHINRMNSKRYPH 876
Query: 599 LMVTGKVEGKRPRGRSLKRWSDQI 528
+++ G + GKRPRGR KRW+D I
Sbjct: 877 ILLNGNIHGKRPRGRPAKRWTDCI 900
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLER 600
FEM C RR++ + + N + L ++ Q + ++YFGHV R +
Sbjct: 906 FEMACLRRIMGVTRLDKIRNTHIKESLNLD--QDVMDKVSTKRIKYFGHVLRMKPTRYPK 963
Query: 599 LMVTGKVEGKRPRGRSLKRWSDQISE 522
+ V GKV G RPRGR KRW D ISE
Sbjct: 964 IAVEGKVTGNRPRGRPPKRWLDCISE 989
>UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n=2;
Bos taurus|Rep: UPI0000F31248 UniRef100 entry - Bos
Taurus
Length = 313
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = -2
Query: 773 MWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLM 594
++C+RR L WT ++L + + L + +Q+I+ GH+ +R D+LE+ +
Sbjct: 221 IFCYRRTLFCSWTQPPVQTTLLSS-SVPQIEHLILSAVQAILT--GHLMQR-TDSLEKTL 276
Query: 593 VTGKVEGKRPRGRSLKRWSDQISE 522
+ GK+EG+R R R RW D I++
Sbjct: 277 MLGKIEGRRRRVRQRMRWLDGITD 300
>UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos
taurus|Rep: LOC534369 protein - Bos Taurus
Length = 87
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = -2
Query: 650 MRYFGHVARRGVDNLERLMVTGKVEGKRPRGRSLKRWSDQISEQTSGHLALHYTREL 480
++YFGH+ RR VD+LE+ ++ G + GKR GR RW + I++ S ++L REL
Sbjct: 7 LQYFGHLMRR-VDSLEKTLMLGGIGGKRRSGRQRMRWLNDITD--SNDVSLSELREL 60
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENA--QRLSATCLQSIMRYFGHVARRGVDNL 606
FEM C R +L + + N + +L + + + ++ CL ++FGHV R L
Sbjct: 406 FEMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCL----KWFGHVLRMPHHRL 461
Query: 605 ERLMVTGKVEGKRPRGRSLKRWSDQI 528
G+RPRGR KRW DQ+
Sbjct: 462 PYQAFQNDFNGRRPRGRPPKRWKDQV 487
>UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=4; Deuterostomia|Rep: PREDICTED:
similar to reverse transcriptase-like -
Strongylocentrotus purpuratus
Length = 565
Score = 45.6 bits (103), Expect = 0.002
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHV 630
FEMWC+RR+L++ W ++TN+ VL ++ + R ++ + YFGH+
Sbjct: 186 FEMWCYRRLLQVSWKDKKTNVWVLEKIGTDLTIRRG--IMERKLNYFGHI 233
>UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to reverse transcriptase-like -
Ornithorhynchus anatinus
Length = 176
Score = 40.3 bits (90), Expect = 0.056
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 779 FEMWCWRRVLRIPWTAQRTNISVLHQLK 696
FE W WRR+LRIP A RTN +L Q+K
Sbjct: 141 FETWGWRRLLRIPRAAHRTNKWILQQMK 168
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 40.3 bits (90), Expect = 0.056
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 218 FLLLRWVDQLIVHLVLSDYW 159
FLLLRWVD+L HLVLS YW
Sbjct: 154 FLLLRWVDELTAHLVLSGYW 173
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 39.9 bits (89), Expect = 0.075
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = -2
Query: 761 RRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLMVTG- 585
R +L I + ++TN + Q K+++ L A + + GH++RR DN +T
Sbjct: 328 RSILSITYKDRKTNKWIREQTKVQDI--LEAEKRRK-WNWAGHISRRN-DNRWSSAITHW 383
Query: 584 -KVEGKRPRGRSLKRWSDQISE---QTSGH 507
EGKR RGR KRW D++ + QT+ H
Sbjct: 384 TPYEGKRNRGRQRKRWRDELQQFWGQTNWH 413
>UniRef50_UPI0000F34067 Cluster: UPI0000F34067 related cluster; n=1;
Bos taurus|Rep: UPI0000F34067 UniRef100 entry - Bos
Taurus
Length = 129
Score = 39.5 bits (88), Expect = 0.099
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = -2
Query: 782 CFEMWCWRRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLE 603
C W+ L++PWTA +L ++ E + L L ++YFGH+ RR ++LE
Sbjct: 22 CMYKLGWKCFLKVPWTA------ILKEINFEFS--LEGLMLTLKLQYFGHLMRR-ANSLE 72
Query: 602 RLMVTGKVEGKRPRGRSLKRWSDQISEQTSGHLALHYTRELT 477
+ T + EG R R + RW D I + S ++L +E+T
Sbjct: 73 K---TDETEG-RGRKQHRMRWLDDIID--SMDMSLSQLQEMT 108
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 38.7 bits (86), Expect = 0.17
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 650 MRYFGHVARRGVDNLERLMVTGKVEG-KRPRGRSLKRWSDQISEQTSGHLALHYTRELT 477
+R+FGHV RR D R VEG +R RGR K W + I + + LH T ++T
Sbjct: 622 LRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLA---MLHITEDMT 677
>UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 890
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = -2
Query: 761 RRVLRIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLMVTGK 582
R L + W+ TNI + + +SA +R GH R ++ + +++
Sbjct: 800 RAALNVNWSDHMTNIELYRDITP-----ISARLRDRRLRLSGHCWRSKIEIISQMLFWEP 854
Query: 581 VEGKRPRGRSLKRWSDQISEQT 516
GKR RGR + DQ+ + T
Sbjct: 855 SRGKRTRGRPASTYIDQLEKDT 876
>UniRef50_UPI0000EBE766 Cluster: PREDICTED: similar to
Uncharacterized protein C10orf64; n=1; Bos taurus|Rep:
PREDICTED: similar to Uncharacterized protein C10orf64 -
Bos taurus
Length = 895
Score = 34.7 bits (76), Expect = 2.8
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = -2
Query: 749 RIPWTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLMVTGKVEGK 570
R P Q++ +++L + C S+ R V+ + +++ +V E
Sbjct: 60 RSPAEQQKSLLNLLPLFLKAWEHSVGIICFPSLQRLAEDVSNQFAQEIQKALVGKPAEQA 119
Query: 569 RPRGRSLKRWSDQISEQTSGHLALHYTRELTGTD 468
R L +W GHL L LTGTD
Sbjct: 120 RVAAGKLLQWKGDADVHQEGHLLLKSVYVLTGTD 153
>UniRef50_Q5ALW4 Cluster: Putative uncharacterized protein SMP2;
n=1; Candida albicans|Rep: Putative uncharacterized
protein SMP2 - Candida albicans (Yeast)
Length = 781
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 614 DNLERLMVTGKVEGKRPRGRSLKRWSDQISEQTSGHLALHYTRELTGTDVG*QSTS 447
D L + + ++EG+ +G +K W IS +GH + T E G+++ ST+
Sbjct: 202 DELFQKIFFEEIEGEYSQGEKIKAWEQFISRDENGHYRISNTGEFEGSEMEDDSTA 257
>UniRef50_Q3LW96 Cluster: T-complex protein eta SU; n=1;
Bigelowiella natans|Rep: T-complex protein eta SU -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 502
Score = 33.9 bits (74), Expect = 4.9
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +1
Query: 304 VWH*IISSEQFTITVYFLRCLKEIIKHINFFFFFSIA 414
++H II+S +++ YFL +K + IN++ F+ I+
Sbjct: 43 IYHMIINSSSYSVKFYFLSFVKHLYNQINYYTFYIIS 79
>UniRef50_O49367 Cluster: Putative uncharacterized protein
F10M6.130; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F10M6.130 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 222
Score = 33.5 bits (73), Expect = 6.5
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -2
Query: 740 WTAQRTNISVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLMVTGKVEGKRPR 561
+TA R S L + K A + + GH RG LERL ++ ++ K +
Sbjct: 58 YTAGRCEDSSLMRSKKSEGTASFAVFTVLMAGFAGHFWYRGKATLERLALSRAIDEKSKK 117
Query: 560 GRSLKRWSDQISEQTSGHLALHYTRELTGTDVG 462
R LKR + I + S L + + + G DVG
Sbjct: 118 IRLLKREVEAIELKPSNFLPIDNDKAILG-DVG 149
>UniRef50_A4NNK4 Cluster: Putative uncharacterized protein; n=1;
Haemophilus influenzae PittHH|Rep: Putative
uncharacterized protein - Haemophilus influenzae PittHH
Length = 430
Score = 33.1 bits (72), Expect = 8.6
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -2
Query: 740 WTAQRTNI-SVLHQLKMENAQRLSATCLQSIMRYFGHVARRGVDNLERLMVTGKVEGKRP 564
WT +R++I + QL +EN R SA S + ++NLER ++TG + +
Sbjct: 277 WTTERSDILQSVRQLDIENLVRQSANTRASARPKQQQFRKSLIENLERCVITGNMLTRVL 336
Query: 563 RGRSLKRWSDQISEQTSGHLAL 498
+ +K ++ S+ S L L
Sbjct: 337 QAAHIKPYAYGGSDDISNGLLL 358
>UniRef50_A7S326 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1230
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 617 VDNLERLMVTGKVEGKRPRGRSLKRWSDQISEQTSGHLALHYTRELTGTDV 465
+ R+ + K RPR R +++ S + SG L H R L+ TDV
Sbjct: 325 ITRARRITIARKSSVTRPRSREIRKGSCSSFDSVSGMLPAHLARRLSKTDV 375
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,625,274
Number of Sequences: 1657284
Number of extensions: 16698273
Number of successful extensions: 36745
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36730
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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