Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2000
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.8  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 738 DSPTHEHLGPTSA*NGERSTPVCHLSAKHNA 646
           DSP+  H+  T+A NG + T V + S K  A
Sbjct: 111 DSPSSMHMANTAAPNGHQ-TQVVYASCKLQA 140


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 222 VSPECTRINNKRKKP 266
           V   CTR+NN+ +KP
Sbjct: 405 VFESCTRLNNESRKP 419


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 738 DSPTHEHLGPTSA*NGERSTPVCHLSAKHNA 646
           DSP+  H+  T+A NG + T V + S K  A
Sbjct: 113 DSPSSMHMANTAAPNGHQ-TQVVYDSCKLQA 142


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +1

Query: 517 VCSEIWSDQRLRLRPLG---RFPSTFPVTIRRSKLST 618
           +C EIW      LRP       P      I R+K++T
Sbjct: 226 ICIEIWQSSESSLRPRSSQKSAPGKRTPLISRAKINT 262


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 354 KINSNCKLLRTYYLMPNLLAI*V*KETFDTVFSVYYLCEYIQGSPFFI 211
           K+ S  + + + + +  L++I V    FD +F  YYL     G   F+
Sbjct: 239 KLTSVMQKINSAFSVQLLVSIGV--SLFDVLFQAYYLYYVATGKASFV 284


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 354 KINSNCKLLRTYYLMPNLLAI*V*KETFDTVFSVYYLCEYIQGSPFFI 211
           K+ S  + + + + +  L++I V    FD +F  YYL     G   F+
Sbjct: 239 KLTSVMQKINSAFSVQLLVSIGV--SLFDVLFQAYYLYYVATGKASFV 284


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 492 HQGTNRNRCRLTVDKLKRSHDP 427
           + GTN+N  RL+     ++ DP
Sbjct: 115 NNGTNKNMRRLSTTTQNKNDDP 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,681
Number of Sequences: 336
Number of extensions: 4211
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)