Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1996
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0482 + 18218163-18218362,18220388-18220446,18223027-182230... 160 1e-39
10_08_0478 + 18192636-18192784,18192991-18193052,18193381-181934... 157 7e-39
07_03_1689 + 28710936-28711129,28711283-28711341,28711858-287118... 134 6e-32
07_03_0230 + 15526504-15526673,15526809-15526867,15527135-155271... 103 2e-22
01_05_0126 - 18391879-18391937,18392021-18392102,18392508-183926... 51 1e-06
03_06_0334 + 33208266-33208481,33208789-33208940,33209141-332092... 31 1.3
03_02_0109 + 5671418-5671631,5675610-5675690,5676249-5676340,567... 29 5.4
11_08_0001 + 27467447-27467707,27467831-27468433 28 7.2
01_05_0386 - 21683909-21685334,21685513-21685541 28 7.2
02_05_0170 - 26431937-26434282 28 9.5
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 28 9.5
>10_08_0482 +
18218163-18218362,18220388-18220446,18223027-18223083,
18223245-18223279,18223617-18223720,18223870-18223945,
18224045-18224103,18224183-18224248,18224338-18224421,
18224503-18224567,18224658-18224740,18224832-18224903,
18225166-18225306,18225395-18225456,18225539-18225605,
18225863-18226075
Length = 480
Score = 160 bits (389), Expect = 1e-39
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Frame = +3
Query: 96 ALNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLG 275
A NGL TP MGW +W F C I+E +I+ TAD +V+ G GY+Y+
Sbjct: 55 AFENGLGRTPQMGWNSWNHFYC----------GINEQIIRETADALVNTGLAKLGYQYVN 104
Query: 276 IDDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAG-YPGVL 452
IDDCW E +RD +G VP+R+ FP+G+KA+ADY+H+KGLK G+Y D G+ TC+ PG L
Sbjct: 105 IDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSL 164
Query: 453 GNEKIDINTFVEWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSW 614
+E+ D+ TF W +DYLK D C + + Y + G++I +S C W
Sbjct: 165 DHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEW 219
>10_08_0478 +
18192636-18192784,18192991-18193052,18193381-18193437,
18193771-18193805,18193940-18194043,18194238-18194313,
18194469-18194527,18194879-18194962,18195065-18195129,
18195241-18195323,18195670-18195760,18195847-18196157
Length = 391
Score = 157 bits (382), Expect = 7e-39
Identities = 74/142 (52%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Frame = +3
Query: 99 LNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLGI 278
L NGLA PPMGW +W F C + E +I+ TAD +VS G AGY+Y+ I
Sbjct: 39 LANGLATAPPMGWNSWNHFACDGN---------GEDVIRETADALVSTGLAAAGYKYVNI 89
Query: 279 DDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAG-YPGVLG 455
DDCW E RD KG LV ++K FP+G+KA+ADY+HSKGLK G+Y D G TCA PG LG
Sbjct: 90 DDCWAEPQRDSKGNLVANKKTFPHGIKALADYVHSKGLKLGIYSDAGFKTCAKVQPGSLG 149
Query: 456 NEKIDINTFVEWEIDYLKLDGC 521
+E+ D TF W +DYLK D C
Sbjct: 150 HEEQDAKTFASWGVDYLKYDNC 171
>07_03_1689 +
28710936-28711129,28711283-28711341,28711858-28711892,
28712123-28712226,28712325-28712397,28712495-28712553,
28712656-28712721,28712815-28712898,28712995-28713059,
28713152-28713342,28713522-28713612,28714076-28714134,
28714732-28714872,28715214-28715321
Length = 442
Score = 134 bits (325), Expect = 6e-32
Identities = 81/203 (39%), Positives = 102/203 (50%), Gaps = 1/203 (0%)
Frame = +3
Query: 99 LNNGLAMTPPMGWLTWERFRCITDCEKYPNECISESLIKRTADLMVSEGYLDAGYEYLGI 278
LNNGLA+TP MGW +W F C I+E++I+ T
Sbjct: 54 LNNGLALTPQMGWNSWNFFACN----------INETVIRDT------------------- 84
Query: 279 DDCWLEKTRDDKGRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCAGYPGVLGN 458
DDCW R K +L+PD K FP+G+K +ADY+H KGLK G+Y D G TC PG L +
Sbjct: 85 DDCWSNVKRGKKDQLLPDPKTFPSGIKDLADYVHGKGLKLGIYSDAGIFTCQVRPGSLHH 144
Query: 459 EKIDINTFVEWEIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSWPAYQEEK 635
EK D F W +DYLK D CY I+ YP LN+TGR I YS C W Q++
Sbjct: 145 EKDDAAIFASWGVDYLKYDNCYNLGIKPKDRYPPMRDALNSTGRQIFYSLCEWG--QDDP 202
Query: 636 KILPNYASIAEHCNLWRNYDDIE 704
+ N WR DDI+
Sbjct: 203 ALWAGKVG-----NSWRTTDDIQ 220
>07_03_0230 +
15526504-15526673,15526809-15526867,15527135-15527139,
15528165-15528268,15528362-15528437,15528646-15528704,
15528803-15528868,15529372-15529455,15529608-15529672,
15529758-15529840,15529949-15530039,15530142-15530194,
15530285-15530428,15530562-15530675
Length = 390
Score = 103 bits (247), Expect = 2e-22
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +3
Query: 315 GRLVPDRKRFPNGMKAIADYIHSKGLKFGMYEDYGNLTCA-GYPGVLGNEKIDINTFVEW 491
G + D K+FP+G+KA+ADY+HSKGLK G+Y G+ TC+ PG LG E ID TF W
Sbjct: 79 GYIAADPKKFPSGIKALADYVHSKGLKLGIYSSAGSRTCSKTMPGSLGYEDIDAKTFASW 138
Query: 492 EIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSILYS-CSW 614
+DYLK D C D +P L TGR I YS C W
Sbjct: 139 GVDYLKYDNCNSDGSSETVRFPKMSFALRKTGRPIFYSICEW 180
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 99 LNNGLAMTPPMGWLTWERFRC 161
L+NGL TP MGW +W F C
Sbjct: 46 LDNGLGRTPQMGWNSWNHFGC 66
>01_05_0126 -
18391879-18391937,18392021-18392102,18392508-18392667,
18392739-18392807,18392850-18392992,18393069-18393203,
18393283-18393341,18394090-18394187,18394347-18394510,
18394586-18394647,18394803-18394977,18396331-18396588,
18396694-18396841,18398458-18398813
Length = 655
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +3
Query: 102 NNGLAMTPPMGWLTWERFRCITDCEKYPN--ECISESLIKRTADLMVSEGYLDAGYEYLG 275
N LA PP GW +++ F I D Y E ++E L+ + V + Y +
Sbjct: 125 NEQLAEFPPRGWNSYDSFSWIVDENTYMQNAEILAEKLLPHGYEFAVIDYLWYRKYVHGA 184
Query: 276 IDDCWLEKTRDDKGRLVPDRKRFPN-----GMKAIADYIHSKGLKFGMY 407
D + D+ GR PD +RFP+ G +A+ +H GLKFG++
Sbjct: 185 YTDSYGFDNIDEWGRPFPDLQRFPSSRIDKGFSQLANKVHGMGLKFGIH 233
>03_06_0334 +
33208266-33208481,33208789-33208940,33209141-33209221,
33209371-33209491
Length = 189
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 63 ILVFLTISHSYALNNGLAMTPPMGWLTWE--RFRCITDCE 176
IL+ IS +LNN ++ +GW W+ R+RCI E
Sbjct: 146 ILLMDAISRMNSLNNAISRMNSLGWSLWDYSRWRCILALE 185
>03_02_0109 +
5671418-5671631,5675610-5675690,5676249-5676340,
5676433-5676513,5676594-5676691,5676872-5676953,
5677050-5677088
Length = 228
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 549 GYPDFGKLLNATGRSILYSCSWP 617
G+P FG LL A G +L+S WP
Sbjct: 171 GWPFFGMLLEAYGFVVLFSGFWP 193
>11_08_0001 + 27467447-27467707,27467831-27468433
Length = 287
Score = 28.3 bits (60), Expect = 7.2
Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 6/145 (4%)
Frame = +3
Query: 324 VPDRKRFPNGMKAIADYIHSKGLKFGMYEDY--GNLTCAG--YPGVLGNEKIDINTFVEW 491
+P+R G Y+HS GLK ++ D GN+ P V ++ ++
Sbjct: 92 LPERLDIAIGSAEALAYMHSHGLKSIIHGDVKPGNILLDDNLVPKVSDFGSAELVLKIKN 151
Query: 492 EIDYLKLDGCYIDPIQMDKGYPDFGKLLNATGRSI--LYSCSWPAYQEEKKILPNYASIA 665
E + D YIDP GY + + G + L + Y K +L +
Sbjct: 152 ERRTVSADLNYIDPTYTSTGYFSDKSDVYSFGLVLLELITRKKSIYANNKSLLVEFIKYK 211
Query: 666 EHCNLWRNYDDIERLLGISYEDHGL 740
+ WR D E L + E H +
Sbjct: 212 KDQQQWRGMYDQELLSTEALETHSI 236
>01_05_0386 - 21683909-21685334,21685513-21685541
Length = 484
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 447 VLGNEKIDINTFVEWEIDYLKLDGCYIDPIQ-MDK-GYPDFGKLLNATGRSILYSCSWPA 620
V G K+D + ++ +YL+ I +Q +D+ YP+ +N + + + S P
Sbjct: 397 VPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNAAMSINTAAATTMATSSSPT 456
Query: 621 YQEEKKILPNYA 656
Y +P +A
Sbjct: 457 YNNSNAAMPAFA 468
>02_05_0170 - 26431937-26434282
Length = 781
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 453 GNEKI--DINTFVE-WEIDYLKLDGCYIDPIQMDK 548
G EK+ D+N F + +EID ++++ Y+DP Q K
Sbjct: 551 GWEKLLDDVNQFCDLYEIDMMEMESTYVDPRQPRK 585
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 609 SWPAYQEEKKILPNYASIAEHCNLWRNYDDIERLLGISYED 731
SW A+ + ++++ A N R D++RL+G +ED
Sbjct: 69 SWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFED 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,023,168
Number of Sequences: 37544
Number of extensions: 496463
Number of successful extensions: 1171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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