Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1996
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.6  
Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.     24   6.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.0  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 397 SACTKIMETSHVPVTPGCLETKKSISTHLSN 489
           S C+K   TS  P TP  L +  S S+  S+
Sbjct: 777 SRCSKPSVTSTTPPTPASLSSSSSSSSSASS 807


>Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = -3

Query: 349 FGNRFLSGTSRPLSSRVFSNQQSSIPKYSYPASRYPSLTIKSAVLFIRLSLMHSLGYFSQ 170
           FGN    G  R    +        + ++ + A     +TI    LF  L+   +LG+  +
Sbjct: 119 FGNAAPDGRKRLAFEKAVELLNIFLSEHEFVAGS--KMTIADISLFATLATACTLGFILR 176

Query: 169 SVIHLKRSHVS 137
             +H+ R +V+
Sbjct: 177 PYVHVDRWYVT 187


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 180  YPNECISESLIKRTADLMVSEGYLDAGYEYLGIDDCWLEKTRDDKGRL 323
            + N    +   K +A+ M  E   DA  E LGID+   ++   D+G L
Sbjct: 1199 HKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDDEGEGDEGPL 1246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 874,736
Number of Sequences: 2352
Number of extensions: 20983
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)