Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1994
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.           58   5e-11
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           56   2e-10
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           34   0.001
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           30   0.019
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.7  

>U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.
          Length = 45

 Score = 58.4 bits (135), Expect = 5e-11
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 337 MHNLNKAFDRLRGHLPSLGADRQLSKYETLQMAQTY 444
           M++LN AFDRLR  +PSLG DR+LSK+ETLQMAQTY
Sbjct: 10  MNSLNDAFDRLRDVVPSLGNDRKLSKFETLQMAQTY 45


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 337 MHNLNKAFDRLRGHLPSLGADRQLSKYETLQMAQTY 444
           M+ LN+AFDRLR  +PSL AD +LSK+ETLQMAQTY
Sbjct: 10  MNGLNEAFDRLRQVIPSLDADHKLSKFETLQMAQTY 45


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
 Frame = +1

Query: 346 LNKAFDRLRGHLP----------SLGADRQLSKYETLQMAQTYIAALYELL 468
           +N  F  LR H+P          S G +++LSK ETL+MA  YI +L +LL
Sbjct: 68  VNNGFANLRQHIPNFIAAAFESNSRGGNKKLSKVETLRMAVEYIRSLEDLL 118


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 29.9 bits (64), Expect = 0.019
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +1

Query: 391 GADRQLSKYETLQMAQTYIAALYELLQ 471
           GA ++LSK ETL++A  YI +L ++++
Sbjct: 130 GASKKLSKVETLRLAVEYIRSLKQMIE 156


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 167 WLMLPSIEGVGSKLDLPESGDLGHVR 90
           W   P+  GV S++ LP+   LGH R
Sbjct: 199 WNEGPNSVGVSSEVSLPQFKVLGHRR 224


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 516 LNKYPCSFG*ITLHLLQELVKGGYVRLSHLQGLVFR 409
           + K  C+   ++LH L+    G  +++  L  LVF+
Sbjct: 14  VKKRKCTVSNVSLHSLKNKRSGASLQVGILDSLVFK 49


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 167 WLMLPSIEGVGSKLDLPESGDLGH 96
           W   P+  GV +++ LP+   LGH
Sbjct: 17  WNEGPNSVGVSNEVSLPQFKVLGH 40


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 253 NLLVSRCLPRCLLEPC 206
           NLL S C   CLL  C
Sbjct: 189 NLLKSVCADLCLLSEC 204


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 46  FSNDVMLEYATEECYLTWPRSPDS-GRSS 129
           + N +    +  +C++  PR+PD  G+ S
Sbjct: 184 WQNSIRHSLSFNDCFVKVPRTPDKPGKGS 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,123
Number of Sequences: 336
Number of extensions: 2937
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)