Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1993
         (413 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153...    28   3.4  
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659...    27   7.8  

>08_02_0433 -
           17114880-17114972,17115053-17115149,17115244-17115306,
           17115765-17115918,17115992-17116178,17116567-17116871,
           17117638-17117803,17118261-17118652,17119032-17119208,
           17119565-17119604,17119762-17119809,17122393-17122428,
           17122832-17123104
          Length = 676

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 60  NSKNSYSTLSVTGLEALNRGVNAP 131
           ++ N++S + VTG+  LN G N P
Sbjct: 637 SASNTFSNVKVTGIRPLNEGSNPP 660


>02_02_0078 +
           6587491-6588021,6588160-6589151,6592430-6592607,
           6592635-6592794,6592992-6593158,6593246-6593869
          Length = 883

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 280 NWYLQSCKFWEARYQRRARSF 342
           +WY  +C FW+A  Q R+ SF
Sbjct: 507 HWYFPNCSFWDAP-QPRSASF 526


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,906,894
Number of Sequences: 37544
Number of extensions: 219995
Number of successful extensions: 466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)