Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1990
(423 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0221 - 1753458-1753732,1753908-1754055 36 0.018
08_01_0925 + 9117217-9117576,9117674-9117749,9118460-9118592,911... 30 0.67
06_03_1172 - 28147957-28148274,28149362-28149877 30 0.88
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 30 0.88
04_04_1125 + 31085106-31085714 29 1.2
04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155 29 1.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 1.5
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 29 2.0
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 28 2.7
11_01_0385 + 2915532-2916482 27 4.7
10_08_0229 - 16016818-16017387 27 4.7
09_04_0252 + 16098848-16099142,16099258-16099375,16100474-161005... 27 4.7
06_03_0652 + 23166595-23166749,23168015-23168225,23168307-23168840 27 4.7
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 27 4.7
05_06_0048 + 25168115-25168238,25178910-25179511 27 4.7
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 27 4.7
04_04_0702 + 27383876-27384862 27 4.7
02_04_0526 - 23682012-23682533,23682647-23682843,23683050-236830... 27 4.7
01_01_0352 + 2799748-2799865,2800368-2800412,2800890-2801121,280... 27 4.7
01_01_0046 - 331758-332627 27 4.7
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 27 6.2
07_01_0277 - 2038757-2039542 27 6.2
03_06_0100 - 31647506-31647664,31647752-31647835,31647933-316480... 27 6.2
02_02_0663 - 12740733-12741104,12741260-12741326,12741709-127418... 27 6.2
02_01_0302 - 2021221-2023305 27 6.2
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305 27 6.2
11_04_0220 + 14991666-14992892 27 8.2
10_05_0106 - 9220354-9220812,9220975-9221124 27 8.2
06_01_0486 - 3455030-3455770 27 8.2
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 27 8.2
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 27 8.2
02_04_0176 + 20658610-20659836 27 8.2
02_03_0411 - 18739279-18739902,18741471-18741671 27 8.2
>08_01_0221 - 1753458-1753732,1753908-1754055
Length = 140
Score = 35.5 bits (78), Expect = 0.018
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 382 DPLQERSVCWRRCFLTQP--PHHVRRVQIWRRWRSEAGTSPERV 257
D + RS WRRCF P+H+ RV+ R+R+ G P R+
Sbjct: 67 DAVWRRSPPWRRCFSIPLSFPYHILRVKTLLRFRTSGGGDPRRI 110
>08_01_0925 +
9117217-9117576,9117674-9117749,9118460-9118592,
9118684-9118795,9119121-9119180,9119425-9119516,
9119628-9119697,9119776-9119880
Length = 335
Score = 30.3 bits (65), Expect = 0.67
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 248 PAGYPFWASPGF-APPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRTSL 397
P W +PG+ A PP + YA++ + + +PSP G ++T L
Sbjct: 180 PPAVSMWGTPGYIAAPPPYNHYAAYSVPPVAMTSPSPVPGPTAYAPVQTLL 230
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.9 bits (64), Expect = 0.88
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 218 GLNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLL 373
G P P+ P+ YPF F PPP P A +P P+ S+L
Sbjct: 9 GAPPPPPPSPPSVYPFLPPATFIPPPPPAATAEPYAPPSLIISPPPSPSSVL 60
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 29.9 bits (64), Expect = 0.88
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 235 DSNVPGGLPVLG*SRLRSSTDAR-SVRVAHDAAAA*GSTFASKRIAPGG 378
D + G +P G + +ST R SVRVA DAAA T +S A G
Sbjct: 587 DEEIVGRVPEFGLALPGTSTSGRGSVRVAGDAAATAAGTSSSSPAAQAG 635
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANG 364
P TPT P P+ +P PPPTP A+ APS G
Sbjct: 67 PATPTPPTPTPWTPTPA-TPPPTPATPATPTTPPTPAPAPSTPTG 110
>04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155
Length = 918
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSP 355
P TP A + F ASP +PPP P L H + +P P
Sbjct: 2 PPTPPLAALHRFLASP--SPPPLPSLLTLHALAVTSGLSPRP 41
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Frame = +2
Query: 218 GLNGPETPTYPAGY-----PFWASPGFAPPPTP 301
GL GP P PAG+ P A G APPP P
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPP 1188
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 281 FAPPPTPDLYASHMMRRLREEAPSPANGSLLE 376
FAPPP P + A+ ++++ E S ++ S L+
Sbjct: 427 FAPPPAPHMSATALLQKAAEVGASQSSSSFLK 458
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 260 PFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRTSLQRSG 409
P+ P APPP P+L + ++ PSP GS LE I+ + G
Sbjct: 829 PYLVDPTAAPPPVPELVHTSLI-----PTPSPQLGSGLETPIQIDSEIEG 873
>11_01_0385 + 2915532-2916482
Length = 316
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTPDLYASH 319
P P++P P W PG PP P + SH
Sbjct: 226 PPFPSHPPPTPAWPQPGNKWPPLPP-FPSH 254
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTPDLYAS 316
P P +P P W PG PP P + S
Sbjct: 272 PPFPFHPPPMPAWPHPGNQWPPLPPFHGS 300
>10_08_0229 - 16016818-16017387
Length = 189
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 357 AGEGASSRSRRIMCDAYRSGVGGGAKPGLAQNG*PAGYVGVSG 229
+G G S S ++ D YR G G G GY G SG
Sbjct: 88 SGSGRGSSSSQVGPDPYRGSSNAGGTGGGEGGGRADGYYGSSG 130
>09_04_0252 +
16098848-16099142,16099258-16099375,16100474-16100552,
16101005-16101250
Length = 245
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 224 NGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANG 364
+GP TP+ PA P SP F PTP S ++LR A A+G
Sbjct: 80 SGPSTPSSPASVP--DSP-FGSAPTPK--GSEGWKKLRRGAARMADG 121
>06_03_0652 + 23166595-23166749,23168015-23168225,23168307-23168840
Length = 299
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 274 SRLRSSTDARSVRVAHDAAAA*GSTFASKRIAPGGD--HPDKPAAVRS 411
+RL T V V +DA G ++A R+A GD HP P +RS
Sbjct: 151 ARLIGETAEPFVNVIYDAEPLPGLSWAGGRVALVGDAAHPTTPHGLRS 198
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 212 SNGLNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRT 391
+NGL PE + A + A PG PP Y + RE +L +RT
Sbjct: 203 TNGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNLRHSSLRT 262
Query: 392 SLQRSGAVL 418
+++R+ L
Sbjct: 263 TIERAFGAL 271
>05_06_0048 + 25168115-25168238,25178910-25179511
Length = 241
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -1
Query: 375 SRSDPFAGEGASSRSRRIMCDAYRSGVGGGAKPGLAQNG*PAGYVGV 235
+R P A RSR + A R+GVG GA G + G P VGV
Sbjct: 193 ARLGPVAAPPHVRRSRSVAVGAGRAGVGFGAGAGAMRMG-PGVGVGV 238
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 27.5 bits (58), Expect = 4.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 212 SNGLNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANG--SLLEGII 385
SNG+ PE Y A + A PG PP Y H+ +AP +L +
Sbjct: 235 SNGIQIPEGKYYLADEGYAARPGILPPFRGVRY--HLNEYEGRKAPETPQELFNLRHSSL 292
Query: 386 RTSLQRSGAVL 418
RTS++R+ L
Sbjct: 293 RTSVERAFGTL 303
>04_04_0702 + 27383876-27384862
Length = 328
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 254 GYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRTSLQ 400
G WA P PPP AS +R R+ + P +G + G++ +++
Sbjct: 203 GAELWAPP--PPPPAHSAAASTTNKRKRQPSEDPDDGVEVIGVVSKAVK 249
>02_04_0526 -
23682012-23682533,23682647-23682843,23683050-23683098,
23683272-23683429,23683558-23683852
Length = 406
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 89 RALSVGHRNKSRRGARTSLL 30
R L+VGHRN +R+GA LL
Sbjct: 50 RRLAVGHRNLARQGATGGLL 69
>01_01_0352 +
2799748-2799865,2800368-2800412,2800890-2801121,
2801242-2801321,2801417-2801570,2801655-2801733,
2801900-2801984,2802121-2802167,2802301-2802471
Length = 336
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 305 LYASHMMRRLREEAPSPANGSLLEGIIRTSLQRSGAVLM 421
L+A + RRL+EE + + G+I T+L R LM
Sbjct: 226 LHAKELSRRLKEEGANITINCVHPGLIMTNLMRHSFFLM 264
>01_01_0046 - 331758-332627
Length = 289
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 233 ETPTYPAGYPFWASPGFAPPPTP 301
E P +P+W SP PPP P
Sbjct: 7 EQPPQRYWFPYWTSPPPPPPPPP 29
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 248 PAGYPFWASPGFAPPP-TPDLYASHMMRRLREEAPSPAN 361
PA Y A PG A P +Y SHM+ +++ SP N
Sbjct: 893 PAAYRGMAPPGPAVPFFNGHVYPSHMLHPSQQQGASPQN 931
>07_01_0277 - 2038757-2039542
Length = 261
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTP 301
P +YP G+ +A FAPPP P
Sbjct: 233 PTYMSYPDGFDPYAGDIFAPPPPP 256
>03_06_0100 -
31647506-31647664,31647752-31647835,31647933-31648089,
31648181-31648446,31648524-31648796,31648874-31648985,
31649112-31649331,31649476-31649899
Length = 564
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 363 PFAGEGASSRSRRIMCDAYRSGVGGGAKPGLAQNG*PAG 247
P R + CDA R+G GGG G+ + PAG
Sbjct: 24 PLPAAAPPRRRVHVSCDARRTG-GGGGGGGVKREAIPAG 61
>02_02_0663 -
12740733-12741104,12741260-12741326,12741709-12741809,
12741852-12742273,12743678-12743685,12745164-12745396
Length = 400
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 248 PAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLL 373
P P W P + PPP P R S A+GSL+
Sbjct: 39 PPKRPRWEPPPYLPPPPPYPIPQPARPRAAPPPASTASGSLV 80
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTP 301
P + ++P+ P + P F PPPTP
Sbjct: 618 PPSHSHPSTPPSPSGPSFHPPPTP 641
>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
Length = 396
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 333 CVRKHLRQQTDRSWRGSSG 389
C+RKH R+Q DRS G+SG
Sbjct: 230 CIRKHRRRQDDRS-GGASG 247
>11_04_0220 + 14991666-14992892
Length = 408
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 260 PFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRTSLQRSG 409
P+ P A PP P+L + ++ PSP GS LE I+ + G
Sbjct: 282 PYLVDPTAAQPPVPELVHTPLI-----PTPSPQLGSSLETPIQVDSETEG 326
>10_05_0106 - 9220354-9220812,9220975-9221124
Length = 202
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 279 ASLLHRRQICTRRT*CGGCVRKHLRQQTDRSWRGSSGQACSGP 407
A+ R + C +T C ++ Q +R +RG +G+A GP
Sbjct: 78 ATPTRRPEPCRPQTSCSPSAHGAVQDQKNRMFRGVAGRAGEGP 120
>06_01_0486 - 3455030-3455770
Length = 246
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 230 PETPTYPAGYPFWASPGFAPPPTP 301
P TP Y Y +P + PPPTP
Sbjct: 106 PPTPPYVPPYIPPPTPPYVPPPTP 129
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 260 PFWASPGFAPPPTPDLYASHMMRRLREEAPSP 355
P W P F P TP ++ R R P P
Sbjct: 229 PSWPPPSFPPSSTPPSDLDGILSRRRRRTPLP 260
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 26.6 bits (56), Expect = 8.2
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 221 LNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPSPA 358
L+G TPT A P W +P P PT H RR PS A
Sbjct: 59 LHGKPTPTQHAPEPTWVNPS-KPKPTVLSLRRH-RRRSPSSHPSSA 102
>02_04_0176 + 20658610-20659836
Length = 408
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 260 PFWASPGFAPPPTPDLYASHMMRRLREEAPSPANGSLLEGIIRTSLQRSG 409
P+ P A PP P+L + ++ PSP GS LE I+ + G
Sbjct: 282 PYLVDPTAAQPPVPELVHTPLI-----PTPSPQLGSSLETPIQVDSETEG 326
>02_03_0411 - 18739279-18739902,18741471-18741671
Length = 274
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 357 AGEGASSRSRRIMCDAYRSGVGGGAKPGLAQNG*PAGYVGVS 232
A ASS SRR C R GGG A +GY VS
Sbjct: 97 ASRSASSSSRR--CSRARGRGGGGGAAAAASTTTSSGYTSVS 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,051,133
Number of Sequences: 37544
Number of extensions: 250652
Number of successful extensions: 1569
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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