Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1990
         (423 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.0  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    24   2.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   2.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   2.6  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   2.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   3.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   4.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   6.0  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 374 PGAIRLLAKVLPHAAAASCATRTDLASVEERSRD 273
           PGA  +L  V P  AA+    + D+AS+E+ S D
Sbjct: 655 PGAYHVLF-VTPENAASRNEQQEDMASIEDVSLD 687


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 218 GLNGPETPTYPAGYPFWASPG 280
           GL GP  P   AG P +  PG
Sbjct: 332 GLEGPSGPKGDAGVPGYGRPG 352


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 371 GAIRLLAKVLPHAAAASCATRTDLASVEERS 279
           G +  L +++PH   +S A   D+A +E  S
Sbjct: 110 GTVLHLVRIVPHPGHSSSANNYDIALLELES 140


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 212 SNGLNGPETPTYPAGYPFWASPGFAPPP 295
           + G  GP  P  P G      P F PPP
Sbjct: 524 TGGPLGPPPPPPPGGAVLNIPPQFLPPP 551


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 60  EPARCTDISPRWTAFTASTR 1
           EP R  DI  RW +  AS+R
Sbjct: 465 EPTRHLDIFKRWKSILASSR 484


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 5   VEAVKAVQ-RGEMSVHRAGSYYGVPHSTLEYKVKER 109
           +E VKA    G ++VH  G+Y+G+  S +    KE+
Sbjct: 168 LELVKAADVGGSITVHAFGAYFGLAVSFMLRPKKEQ 203


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 375  SRSDPFAGEGASSRSRRIMCDAYRSGVGGGAK 280
            SR+   AG G+ SRSR       RSG   G++
Sbjct: 1085 SRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSR 1116


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 294 GGGAKPGLAQNG*PAGYVGVSGP 226
           GG  +PG      P GY G  GP
Sbjct: 405 GGEGRPGAPGPKGPRGYEGPQGP 427


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 393 LVRMIPSRSDPFAGEGASSRSRRIMCDAYRSGV 295
           LVRM+P+RS P      SSR RRI+ +   +G+
Sbjct: 745 LVRMMPNRSGP-----RSSR-RRIIANTIIAGI 771


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,041
Number of Sequences: 2352
Number of extensions: 7800
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)