Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1988
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77476-1|AAB84361.1|  295|Homo sapiens DAZLA protein protein.          29   6.1  
U66726-1|AAB39935.1|  295|Homo sapiens germline specific RNA bin...    29   6.1  
U66078-1|AAB63596.1|  295|Homo sapiens DAZLA protein.                  29   6.1  
U65918-1|AAC50813.1|  295|Homo sapiens RNA binding protein protein.    29   6.1  
BC027595-1|AAH27595.1|  295|Homo sapiens deleted in azoospermia-...    29   6.1  

>U77476-1|AAB84361.1|  295|Homo sapiens DAZLA protein protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 334 QYSHIVCPTLQTETHYCFTAEIGGSVVPTRADSQEVLPP 218
           Q S++V P      ++C   + G  VVP      E  PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U66726-1|AAB39935.1|  295|Homo sapiens germline specific RNA
           binding protein protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 334 QYSHIVCPTLQTETHYCFTAEIGGSVVPTRADSQEVLPP 218
           Q S++V P      ++C   + G  VVP      E  PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U66078-1|AAB63596.1|  295|Homo sapiens DAZLA protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 334 QYSHIVCPTLQTETHYCFTAEIGGSVVPTRADSQEVLPP 218
           Q S++V P      ++C   + G  VVP      E  PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U65918-1|AAC50813.1|  295|Homo sapiens RNA binding protein protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 334 QYSHIVCPTLQTETHYCFTAEIGGSVVPTRADSQEVLPP 218
           Q S++V P      ++C   + G  VVP      E  PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>BC027595-1|AAH27595.1|  295|Homo sapiens deleted in
           azoospermia-like protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 334 QYSHIVCPTLQTETHYCFTAEIGGSVVPTRADSQEVLPP 218
           Q S++V P      ++C   + G  VVP      E  PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,329,422
Number of Sequences: 237096
Number of extensions: 1350361
Number of successful extensions: 2314
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2314
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)