Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1983
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.1  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   6.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -2

Query: 177  HPAGFHTVYCGGQTIGGALTPRFNASKPVT 88
            H  G+ ++Y   QT+   +   +  +KP++
Sbjct: 930  HAGGWQSIYAQPQTVQDQIVSEYYQNKPIS 959


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 145 RSNYWWGVNASIQRL*TSDT 86
           R ++W  +N +  +L TSDT
Sbjct: 543 REDFWNSINFNENKLHTSDT 562


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 145 RSNYWWGVNASIQRL*TSDT 86
           R ++W  +N +  +L TSDT
Sbjct: 543 REDFWNSINFNENKLHTSDT 562


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +1

Query: 82  FECHWFRGVESRR 120
           + CHW+ G E  +
Sbjct: 192 YSCHWYDGSEEAK 204


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 355 CSGSTNARARR*YRASQNLQLWRYQFFGFG 266
           C G T+  +R    + + +  W+Y  + FG
Sbjct: 14  CQGVTDIHSRNLTNSLKVIYEWKYIDYDFG 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,274
Number of Sequences: 438
Number of extensions: 2623
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)