Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1981
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 62 3e-10
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 60 2e-09
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 52 5e-07
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 51 9e-07
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 47 2e-05
11_03_0226 - 11908455-11908562,11915971-11916240,11916463-119169... 30 2.3
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 3.0
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 29 4.0
02_05_0177 + 26505956-26506202,26506838-26507247,26507448-265076... 29 4.0
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 29 4.0
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 24 4.7
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 29 5.2
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 24 6.0
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 28 6.9
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 62.5 bits (145), Expect = 3e-10
Identities = 45/172 (26%), Positives = 75/172 (43%)
Frame = +3
Query: 189 VIPLFKSGSTDDPSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRST 368
++ + K G + YRPIS+ KI K++ T+L F ++H Q GF +GR
Sbjct: 973 IVLIQKPGKENTVDGYRPISLQNCSVKILSKVLATRLQRVFL--RMIHLDQTGFLKGRCI 1030
Query: 369 TDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSY 548
++ Y + I + + + D +KAFD V +L + L G + + I
Sbjct: 1031 SENLIYATELIQACYRRKCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGL 1090
Query: 549 LSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEV 704
LS V + G K G+ QG L +LF++ + L +E E+
Sbjct: 1091 LSSSKSAVLLNGVPGRWICCKKGLLQGDPLSSYLFILVADVLQRLLERNTEI 1142
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/164 (23%), Positives = 76/164 (46%)
Frame = +3
Query: 168 DLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFG 347
+++ S + + K S + +++RPIS++ KI K++ +L L+ + +G
Sbjct: 366 EILNSSFITLVPKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVILK--LVSDNHYG 423
Query: 348 FTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGA 527
F +G++ D A+ + I Q + + + + D KAFD +EH ++ + H G
Sbjct: 424 FIKGKTIQDCPAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKW 483
Query: 528 LELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLI 659
+E + S V + G + + GV QG L LF++
Sbjct: 484 IEWVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVPLSLLLFVL 527
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 2/160 (1%)
Frame = +3
Query: 228 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAG--AYLIKNI 401
S +RPIS+ L KI K++ +L +++ Q F GR TD+ AY N
Sbjct: 185 SKFRPISLCNVLYKIASKVLANRLKLFLP--DIVSEFQSAFVPGRLITDSSLVAYECLNT 242
Query: 402 FQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVK 581
+ + D+ KA+D +E L L G + + ++ + +
Sbjct: 243 IKKQSNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRIN 302
Query: 582 GNRSSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHE 701
G + G+ QG + P+LFL+ L ++ + +
Sbjct: 303 GELTDTVVPSRGIRQGDPISPYLFLLCTEGLSCMLQKKEQ 342
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/127 (27%), Positives = 56/127 (44%)
Frame = +3
Query: 324 LLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLH 503
++H Q GF +GR ++ Y + I L I D +KAFD V ++L + L
Sbjct: 1 MIHMDQTGFLKGRCISENLIYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQILS 60
Query: 504 HYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDLPSF 683
G D + I + L V + G T K G+ QG L P+LF++ + L
Sbjct: 61 VKGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFILVADVLQRL 120
Query: 684 IESRHEV 704
+E ++
Sbjct: 121 LERNLQI 127
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 111 IASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKIFEKIIL 290
+ S ++ + + G+ P+ + + ++ + K D +YRPIS+ + K+ K ++
Sbjct: 926 LKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLV 985
Query: 291 TQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFC----DLSK 458
+L ++L+ +Q F +GR TD A L F S +++ C DLSK
Sbjct: 986 NRLRPIL--DDLVSKEQSAFIQGRMITD-NALLAFECFHSIQKNKKANSAACAYKLDLSK 1042
Query: 459 AFDCVEHETLVRKLHHYG 512
A+D V+ L L+ G
Sbjct: 1043 AYDRVDWRFLELALNKLG 1060
>11_03_0226 -
11908455-11908562,11915971-11916240,11916463-11916946,
11917148-11918060,11918628-11919300
Length = 815
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 354 RGRSTTDAGAYLIKNIFQSWEESHDCL-GIFCDLSKAFDCVEHETLVRKL 500
+G A + F+ + DC+ ++CD+ +FD V H+ V KL
Sbjct: 371 KGEGVKGAAKKVCSKCFEKGHVADDCVVEVYCDICDSFDHVSHKCPVLKL 420
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 426 DCLGI-FCDLSKAFDCVEHETLVRKLHHYGI 515
D LGI F D+ K D +HE L + L YGI
Sbjct: 1168 DVLGISFTDVYKNSDLYQHEVLTKSLDSYGI 1198
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 360 RSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELI 539
R+ DA L N W S+ C G + + + D +L L +R G L+ +
Sbjct: 111 RNGADAHGILAAN----WSTSNACAGGWIGVGCSGDGRRVTSL--SLPSLDLR-GPLDPL 163
Query: 540 TSYLSGRIQTVDVKGNRSSGT--TLKMGVPQGSIL 638
S+L G ++ +D++GNR +GT TL +GVP +L
Sbjct: 164 -SHL-GELRALDLRGNRLNGTLDTLLLGVPNLKLL 196
>02_05_0177 +
26505956-26506202,26506838-26507247,26507448-26507624,
26507775-26507999,26508089-26508265,26508357-26508593,
26508855-26508944,26509102-26509254
Length = 571
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1
Query: 370 LMQVLI*SKIYFNLGRNRMIVLEFSVTYPKHLTVLNMKHW*GNYITMVLGMVHWNLLLPI 549
L+ + + S++Y LGR+ ++ F+ +P T L+ + W G ++ G+ + + L I
Sbjct: 347 LVGLYVQSRLYLGLGRDGLLPSIFAKVHPTRHTPLHSQIWVGCVAAVLAGLFNVHELSHI 406
Query: 550 YQEG 561
G
Sbjct: 407 LSVG 410
>01_01_0517 +
3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 366 TTDAGAYLIKNIFQ--SWEESHDCLGIFCDLS----KAFDCVEHETLVRKLHHYGIRDGA 527
+T G YLI ++ Q + +E + G L+ K F+C+ +L GIR +
Sbjct: 322 STYVGPYLIDSLVQYLNGDERYASKGQLLVLAFIVAKVFECLSQRHWFFRLQQAGIRARS 381
Query: 528 LELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDL 674
+ Y G + + + +R+SG + + +G LF Y++DL
Sbjct: 382 ALVAVVYQKGLVLSSQSRQSRTSGEMINIISVDADRVG--LFSWYMHDL 428
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 24.2 bits (50), Expect(2) = 4.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 234 YRPISVLPTLSKIFEKII---LTQLLEHFKSNNLLHNKQFG 347
Y PI+VLP+LS++ + I +T+ SN L N G
Sbjct: 376 YPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIG 416
Score = 23.0 bits (47), Expect(2) = 4.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 360 RSTTDAGAYLIKNIFQSWEESHDCLGIF 443
R GAY +NIFQS + + L IF
Sbjct: 447 RKFVTQGAYDTRNIFQSLDLAWSLLRIF 474
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 438 IFCDLSKAFDCVEHETLVRKL 500
+ D+SKAFDCV H+ +++ +
Sbjct: 293 VVADVSKAFDCVSHDMVLKMI 313
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 234 YRPISVLPTLSKIFEKII---LTQLLEHFKSNNLLHNKQFG 347
Y PI+VLP+LS++ + I +T+ SN L N G
Sbjct: 406 YPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIG 446
Score = 22.6 bits (46), Expect(2) = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 360 RSTTDAGAYLIKNIFQSWEESHDCLGIF 443
R GAY +NIFQS + + L IF
Sbjct: 477 RKFVTQGAYDTRNIFQSLDLAWTLLRIF 504
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 312 KSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWE 416
K H K G R TTDA A L ++ +W+
Sbjct: 152 KHKETSHKKDAGLERDGCTTDAAAVLFASVTSAWD 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,039,213
Number of Sequences: 37544
Number of extensions: 368588
Number of successful extensions: 826
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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