Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1981
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 135 5e-32
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 135 5e-32
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 129 3e-30
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 127 2e-29
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 127 2e-29
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 125 7e-29
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 125 7e-29
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 125 7e-29
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 125 7e-29
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 125 7e-29
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 124 1e-28
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 121 1e-27
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 120 2e-27
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 118 9e-27
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 118 9e-27
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 118 9e-27
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 118 9e-27
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 118 1e-26
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 115 6e-26
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 114 1e-25
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 113 3e-25
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 108 7e-24
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 106 4e-23
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 105 6e-23
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 87 3e-17
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 62 8e-10
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 39 0.008
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 36 0.045
AY121628-1|AAM51955.1| 295|Drosophila melanogaster GH24653p pro... 29 6.8
AL121806-15|CAB65887.1| 613|Drosophila melanogaster EG:33C11.1 ... 29 6.8
AE014298-170|AAF45599.1| 613|Drosophila melanogaster CG11405-PA... 29 6.8
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 135 bits (327), Expect = 5e-32
Identities = 78/233 (33%), Positives = 134/233 (57%), Gaps = 2/233 (0%)
Frame = +3
Query: 39 SLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGST 218
+L+ + + + GI LK++ +H+V+I N C++ G FP K +K++P+ K G
Sbjct: 472 ALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKP 531
Query: 219 -DDPSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIK 395
D+P +YRPIS+L LSKI EK+I +L++ +N L Q+GF G +T ++
Sbjct: 532 PDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTI-LPTLKLR 590
Query: 396 NIFQSWEESHDCLGIFC-DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
N + +S +G+ D+ AFD V H+ L+ KL G ++++ ++L+ R +V
Sbjct: 591 NYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSV 650
Query: 573 DVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSL 731
++ ++S+ L GVPQGS+LGP LF I+ +D+P + + LFADD ++
Sbjct: 651 NLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAV 701
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 135 bits (327), Expect = 5e-32
Identities = 78/233 (33%), Positives = 134/233 (57%), Gaps = 2/233 (0%)
Frame = +3
Query: 39 SLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGST 218
+L+ + + + GI LK++ +H+V+I N C++ G FP K +K++P+ K G
Sbjct: 420 ALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKP 479
Query: 219 -DDPSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIK 395
D+P +YRPIS+L LSKI EK+I +L++ +N L Q+GF G +T ++
Sbjct: 480 PDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTI-LPTLKLR 538
Query: 396 NIFQSWEESHDCLGIFC-DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
N + +S +G+ D+ AFD V H+ L+ KL G ++++ ++L+ R +V
Sbjct: 539 NYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSV 598
Query: 573 DVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSL 731
++ ++S+ L GVPQGS+LGP LF I+ +D+P + + LFADD ++
Sbjct: 599 NLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAV 649
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 129 bits (312), Expect = 3e-30
Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Frame = +3
Query: 120 HLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 296
H+ +FN K G FP K S ++ + K G PS+YRPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 297 LLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVE 476
+ H + NN L QFGF T + + I ++E C IF D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVW 589
Query: 477 HETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFL 656
+ L+ K+ + +L+ SYL R+ + + S ++ GVPQGS+LGP L+
Sbjct: 590 LDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYT 648
Query: 657 IYINDLPSFIESRHEVVLFADDTSLLFKIK 746
+Y D P I+ FADDT++L + K
Sbjct: 649 LYTADFP--IDYNLTTSTFADDTAILSRSK 676
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 127 bits (306), Expect = 2e-29
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 1/206 (0%)
Frame = +3
Query: 120 HLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTDD-PSNYRPISVLPTLSKIFEKIILTQ 296
++ +FN K G FP K K+I + K G S+YRPIS+L +SK+FEK +L +
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIR 531
Query: 297 LLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVE 476
L +H +N++ QFGF T + + I ++E C +F D+S+AFD V
Sbjct: 532 LNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVW 591
Query: 477 HETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFL 656
+ L+ K+ + + +L+ SYL R V S+ T++ GVPQGS+LGP L+L
Sbjct: 592 LDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYL 650
Query: 657 IYINDLPSFIESRHEVVLFADDTSLL 734
IY D+P+ SR V FADDT++L
Sbjct: 651 IYTADIPT--NSRLTVSTFADDTAIL 674
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 127 bits (306), Expect = 2e-29
Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Frame = +3
Query: 120 HLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 296
H+ +FN K G FP K S ++ + K G PS+YRPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 297 LLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVE 476
+ H + NN L QFGF T + + I ++E C IF D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVW 589
Query: 477 HETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFL 656
+ L+ K+ + +L+ SYL + + + S ++ GVPQGS+LGP L+
Sbjct: 590 LDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYT 648
Query: 657 IYINDLPSFIESRHEVVLFADDTSLLFKIK 746
+Y D P I+ FADDT++L + K
Sbjct: 649 LYTADFP--IDYNLTTSTFADDTAILSRSK 676
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 125 bits (301), Expect = 7e-29
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 388 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 447
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 448 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 505
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 506 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAG 564
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 565 QIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVL 614
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 125 bits (301), Expect = 7e-29
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 621
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAG 680
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVL 730
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 125 bits (301), Expect = 7e-29
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 621
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAG 680
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVL 730
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 125 bits (301), Expect = 7e-29
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 466 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 525
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 526 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 583
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 584 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAG 642
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 643 QIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVL 692
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 125 bits (301), Expect = 7e-29
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 621
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAG 680
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVL 730
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 124 bits (299), Expect = 1e-28
Identities = 74/245 (30%), Positives = 132/245 (53%), Gaps = 7/245 (2%)
Frame = +3
Query: 24 IKNFNSLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLF 203
++ SL +K + + + LK++ +L I+N ++ FP K + ++ +
Sbjct: 443 VEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIH 502
Query: 204 KSGSTDD-PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAG 380
K G ++ P +YRPIS+L +LSK++E++I +L + +L + QFGF +G ST +
Sbjct: 503 KPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQV 562
Query: 381 AYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR 560
L K+I Q++++ C +F D+ +AFD V H+ L+ K+ ++ SYL R
Sbjct: 563 HRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDR 621
Query: 561 IQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLIYINDLP-----SFIESRHEVV-LFADD 722
V V+ + S ++ GVPQGS+LGP L+ ++ DLP + R ++ +ADD
Sbjct: 622 RFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADD 681
Query: 723 TSLLF 737
+LL+
Sbjct: 682 IALLY 686
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 121 bits (291), Expect = 1e-27
Identities = 72/205 (35%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +P+ KH++V + K G S+++P +YRPIS+
Sbjct: 516 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISL 575
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSK+FE+++L +L ++ FK LH QFGF + T A + + I +++E
Sbjct: 576 LSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQFILEAFERKE 633
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 634 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTG 692
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP 677
+ GVPQGS LGP L+ I+ +D+P
Sbjct: 693 QIGAGVPQGSNLGPLLYSIFSSDMP 717
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 120 bits (289), Expect = 2e-27
Identities = 79/230 (34%), Positives = 131/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 251
I+ +++K++ +L+ I+N ++ G +P+ KH++V + K G S ++P +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISL 563
Query: 252 LPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESH 425
L LSKIFE+++L +L ++ FK LH QFGF + + A + + I +++E
Sbjct: 564 LSGLSKIFERLLLKRLFKVDLFKKAIPLH--QFGFRKEHGSEQQIARVTQFILEAFERKE 621
Query: 426 DCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGR-IQTVDVKGNRSSGT 602
C +F D+S+AFD V HE L+ KL + ++ SYL+ R + D G S
Sbjct: 622 YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTG 680
Query: 603 TLKMGVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLL 734
+ GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 681 QIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVL 730
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 118 bits (284), Expect = 9e-27
Identities = 77/228 (33%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Frame = +3
Query: 84 KVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPT 260
+ ++ + D LV IFN + G FP K + +I + K+G T D +YRPIS+LP+
Sbjct: 266 RTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPS 325
Query: 261 LSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGI 440
L KI E++IL +LL + QFGF T + ++ ++ E +G
Sbjct: 326 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 385
Query: 441 FCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGV 620
F D+ +AFD V H L+ K ++ S+L R V V G +SS + GV
Sbjct: 386 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 444
Query: 621 PQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIK 746
PQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K
Sbjct: 445 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSK 492
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 118 bits (284), Expect = 9e-27
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Frame = +3
Query: 36 NSLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGS 215
NSL +K ++ K + ++ +L+ I+N+ ++ G FP+ KH+ + + K G
Sbjct: 47 NSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGK 106
Query: 216 TDDPSN-YRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLI 392
+ N YRPIS+L LSK+ E+I+L +L + + + QFGF + A +
Sbjct: 107 SPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 166
Query: 393 KNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
+ I ++++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V
Sbjct: 167 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSV 225
Query: 573 DVKGNRSSGT-TLKMGVPQGSILGPFLFLIYINDLP 677
+ G +S ++ GVPQGSILGP L+ IY +D+P
Sbjct: 226 RIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 261
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 118 bits (284), Expect = 9e-27
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Frame = +3
Query: 36 NSLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGS 215
NSL +K ++ K + ++ +L+ I+N+ ++ G FP+ KH+ + + K G
Sbjct: 494 NSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGK 553
Query: 216 TDDPSN-YRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLI 392
+ N YRPIS+L LSK+ E+I+L +L + + + QFGF + A +
Sbjct: 554 SPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 393 KNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
+ I ++++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSV 672
Query: 573 DVKGNRSSGT-TLKMGVPQGSILGPFLFLIYINDLP 677
+ G +S ++ GVPQGSILGP L+ IY +D+P
Sbjct: 673 RIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 118 bits (284), Expect = 9e-27
Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Frame = +3
Query: 36 NSLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGS 215
NSL +K ++ K + ++ +L+ I+N+ ++ G FP+ KH+ + + K G
Sbjct: 494 NSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGK 553
Query: 216 TDDPSN-YRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLI 392
+ N YRPIS+L LSK+ E+I+L +L + + + QFGF + A +
Sbjct: 554 SPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 393 KNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
+ I ++++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSV 672
Query: 573 DVKGNRSSGT-TLKMGVPQGSILGPFLFLIYINDLP 677
+ G +S ++ GVPQGSILGP L+ IY +D+P
Sbjct: 673 RIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 118 bits (283), Expect = 1e-26
Identities = 68/201 (33%), Positives = 108/201 (53%)
Frame = +3
Query: 132 IFNDCIKCGVFPDLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKIFEKIILTQLLEHF 311
+FN K G FP K S +I + K +YRPIS+L LSK+FEK +L ++ H
Sbjct: 16 LFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRISPHL 75
Query: 312 KSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVEHETLV 491
K++N L + QF F + + I ++E C +F D+++AFD V + L+
Sbjct: 76 KTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLM 135
Query: 492 RKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFLIYIND 671
K+ + +L+ SYL R+ V + SS T++ GVPQGS+LGP L+ +Y D
Sbjct: 136 FKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTAD 194
Query: 672 LPSFIESRHEVVLFADDTSLL 734
+P+ + + FADDT+++
Sbjct: 195 IPT--NYQLTIFTFADDTAII 213
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 115 bits (277), Expect = 6e-26
Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 2/216 (0%)
Frame = +3
Query: 36 NSLNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGS 215
NSL +K ++ K + ++ +L+ I+N+ ++ G FP+ KH+ + + K G
Sbjct: 494 NSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGK 553
Query: 216 TDDPSN-YRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLI 392
+ N YRPIS+L LSK+ E+I+ +L + + + QFGF + A +
Sbjct: 554 SPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 393 KNIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTV 572
+ I ++++E C F D+++AFD V H+ L+ KL I +L+ +YLS R +V
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSV 672
Query: 573 DVKGNRSSGT-TLKMGVPQGSILGPFLFLIYINDLP 677
+ G +S ++ GVPQGSILGP L+ IY +D+P
Sbjct: 673 RIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 114 bits (275), Expect = 1e-25
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Frame = +3
Query: 84 KVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPT 260
+ ++ + D L IFN + G FP K + +I + K+G T D +YRP S+LP+
Sbjct: 464 RTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPS 523
Query: 261 LSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGI 440
L KI E++IL +LL + QFGF T + ++ ++ E +G
Sbjct: 524 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 583
Query: 441 FCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGV 620
F D+ +AFD V H L+ K ++ S+L R V V G +SS + GV
Sbjct: 584 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 642
Query: 621 PQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIK 746
PQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K
Sbjct: 643 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSK 690
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 113 bits (271), Expect = 3e-25
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Frame = +3
Query: 120 HLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 296
++ +FN ++ FP K + + K G + +P++YRPIS+LP++SK+FE++I +
Sbjct: 474 YITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVR 533
Query: 297 LLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDCVE 476
++ ++ + QFGF G T + +++ I +++ C +F D+ +AFD V
Sbjct: 534 IVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVW 593
Query: 477 HETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGSILGPFLFL 656
H L K+ + L+ SYL GR V S+ + GVPQGS+LGP L+
Sbjct: 594 HIGLQLKIKQ-TLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYC 652
Query: 657 IYINDLPS---FIESRHEVVLFADDTSLLFK 740
+Y +D+P + + + FADD + ++
Sbjct: 653 LYSHDMPQPDVSLYGKSMLATFADDVCVTYR 683
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 108 bits (260), Expect = 7e-24
Identities = 73/228 (32%), Positives = 121/228 (53%), Gaps = 3/228 (1%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTDDP-SNYRPISV 251
IS +++K+ + + +FN+ + P K S +IP+ K + S+YRPIS+
Sbjct: 455 ISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSSYRPISL 513
Query: 252 LPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDC 431
++KI +KII +L NNL+++KQFGF +G+ST+D Y+ I +S + H
Sbjct: 514 NCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLITKS--KMHTS 571
Query: 432 LGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLK 611
L + D S+AFD V +++++L + ++ I +++S R TV V + SS L
Sbjct: 572 L-VTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLF 630
Query: 612 MGVPQGSILGPFLFLIYINDLPSFIESRHEVVL--FADDTSLLFKIKR 749
G+PQGS + LFLI N L + I E+ +ADD L+ +
Sbjct: 631 NGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNK 678
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 106 bits (254), Expect = 4e-23
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Frame = +3
Query: 75 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGST-DDPSNYRPISV 251
+S +LK++ + + L+ IFN + G +P + + +IP+ K D ++YRPIS+
Sbjct: 459 VSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISL 518
Query: 252 LPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDC 431
L L K EKII +L K +NL+ + Q F ST DA I++ + + +
Sbjct: 519 LSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDA-LLRIQHFASNALSTKNH 577
Query: 432 LGIFC-DLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTL 608
+ I D +AFD V ++ +L +GI LI ++++ R V + S+ L
Sbjct: 578 VSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHIL 637
Query: 609 KMGVPQGSILGPFLFLIYINDLPSFIESRHE---VVLFADDTSLLFKIK 746
G+PQGS L LF+I I D+ + +RH+ + L+ADD + KIK
Sbjct: 638 HNGIPQGSPLSVVLFMIAIEDINDIV-TRHKDIYISLYADDAIIFTKIK 685
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 105 bits (252), Expect = 6e-23
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Frame = +3
Query: 42 LNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTD 221
L + + L GI+ + K+V I HL S+F+ CI+ G FP K +V+ L K D
Sbjct: 446 LKSRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKD 505
Query: 222 --DPSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIK 395
+PS+YR I +LP K+ E I++ ++ E QFGF +GR DA ++
Sbjct: 506 KCEPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFRQGRCVEDAWRHVKS 562
Query: 396 NIFQSWEESHDCLGIFCDLSKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVD 575
++ S + LG F D AFD VE + +L G R+ + L S+ SGR +
Sbjct: 563 SVGAS--AAQYVLGTFVDFKGAFDNVEWSAALSRLADLGCRE--MGLWQSFFSGRRAVI- 617
Query: 576 VKGNRSSGTT---LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLL 734
SSGT + G PQGSI GPF++ I ++ L ++ ++ +ADD LL
Sbjct: 618 ---RSSSGTVEVPVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLL 670
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 86.6 bits (205), Expect = 3e-17
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Frame = +3
Query: 135 FNDCIKCGVFPDLMKHSKVIPLFKS-GSTDDPSNYRPISVLPTLSKIFEKIILTQLLEHF 311
F C+ GVFP K K++ L K G + P +YRP+ +L + K+FE+I+ ++
Sbjct: 445 FQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELIT 504
Query: 312 KSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHD-----------CLGIFCDLSK 458
+S L +Q+GF +G+ST DA +K++ + ++ D C I D+
Sbjct: 505 ESPTGLQGQQYGFRKGKSTLDA----LKSVTDAARKALDGNRWLGGSKKYCAIITLDVKN 560
Query: 459 AFDCVEHETLVRKLHHYGIRDGALELITSYLSGRI-QTVDVKGNRSSGTTLKMGVPQGSI 635
AF+ ++ + + G+ D +I +Y R+ V G RS + GVPQGS+
Sbjct: 561 AFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVPQGSV 618
Query: 636 LGPFLFLIYINDLPSFIESRH-EVVLFADDTSL 731
LGP L+ I + + S + R E+ FADD ++
Sbjct: 619 LGPILWNIMYDGILSISKPRGVELHCFADDVAI 651
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 62.1 bits (144), Expect = 8e-10
Identities = 48/194 (24%), Positives = 86/194 (44%)
Frame = +3
Query: 93 KSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKI 272
KS ++ + ++ I N + CG P ++ ++ + + K+ + P ++RPISV L +
Sbjct: 368 KSAREVPSGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQ 427
Query: 273 FEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQSWEESHDCLGIFCDL 452
I+ T+L S+ +Q GF D + + S + C D+
Sbjct: 428 LNAILATRL----NSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDV 483
Query: 453 SKAFDCVEHETLVRKLHHYGIRDGALELITSYLSGRIQTVDVKGNRSSGTTLKMGVPQGS 632
SKAFD + H ++ L YG G ++ + + G +++ G S GV QG
Sbjct: 484 SKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGD 543
Query: 633 ILGPFLFLIYINDL 674
L P LF + ++ L
Sbjct: 544 PLSPILFNLVMDRL 557
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 615 GVPQGSILGPFLF-LIYINDLPSFIESRHEVVLFADDTSLL 734
GVPQGS+LGP L+ +Y L + R E+V FADD +LL
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALL 90
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 36.3 bits (80), Expect = 0.045
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 372 DAGAYLIKNIFQSWEESHDCLGIFCDLSKAFDC-VEHETLVRKL-HHYGIRDGALELITS 545
++ A +KN ++ E C+ + L+K +H+ ++KL + Y IRDG + I S
Sbjct: 18 ESKAVEMKNKKWNFREFIICVAVTVVLTKIVHVKTQHQQSLQKLSNQYVIRDGDTQYIKS 77
Query: 546 YLSGRIQTVDVKGNRSSGTTLKMGVP 623
S ++ +++ N + + LK+G P
Sbjct: 78 RTSEKVSQLNLNKNNDTASKLKIGAP 103
>AY121628-1|AAM51955.1| 295|Drosophila melanogaster GH24653p
protein.
Length = 295
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -1
Query: 736 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 572
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 111 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 170
Query: 571 TVCILPDK*EVISSNAPSLI 512
C+LP + N S++
Sbjct: 171 HACVLPSPCGINGLNMASVV 190
>AL121806-15|CAB65887.1| 613|Drosophila melanogaster EG:33C11.1
protein.
Length = 613
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -1
Query: 736 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 572
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 429 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 488
Query: 571 TVCILPDK*EVISSNAPSLI 512
C+LP + N S++
Sbjct: 489 HACVLPSPCGINGLNMASVV 508
>AE014298-170|AAF45599.1| 613|Drosophila melanogaster CG11405-PA
protein.
Length = 613
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = -1
Query: 736 NNKDVSS-ANNTTSCRDSIKLGKSFIYIRNKKGPKMEP*GTPI----FNVVPEDLFPFTS 572
NN ++SS ++N TS + +++N+ P T + F P D FP
Sbjct: 429 NNSNISSHSSNATSSTTPTATSSAIEFVKNELVDSQSPYTTALSAERFLFEPSDGFPDIK 488
Query: 571 TVCILPDK*EVISSNAPSLI 512
C+LP + N S++
Sbjct: 489 HACVLPSPCGINGLNMASVV 508
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,532,857
Number of Sequences: 53049
Number of extensions: 670210
Number of successful extensions: 1470
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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