Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1960
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004674-1|AAB61467.1|  714|Drosophila melanogaster GPRK2 protein.     71   2e-12
AE014297-4747|AAF57152.1|  714|Drosophila melanogaster CG17998-P...    71   2e-12
BT011134-1|AAR82801.1|  561|Drosophila melanogaster HL01545p pro...    29   5.4  
AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA...    29   5.4  

>AF004674-1|AAB61467.1|  714|Drosophila melanogaster GPRK2 protein.
          Length = 714

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +2

Query: 425 MELENIVANTVYLKAREXXXXXXXXXXXXWRKILQFPHISQCIDIKTKI 571
           MELENIVANTVYLKARE            WRKILQFPHISQCI++K K+
Sbjct: 1   MELENIVANTVYLKAREGGSDSNKGKSKKWRKILQFPHISQCINLKDKL 49


>AE014297-4747|AAF57152.1|  714|Drosophila melanogaster CG17998-PA
           protein.
          Length = 714

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +2

Query: 425 MELENIVANTVYLKAREXXXXXXXXXXXXWRKILQFPHISQCIDIKTKI 571
           MELENIVANTVYLKARE            WRKILQFPHISQCI++K K+
Sbjct: 1   MELENIVANTVYLKAREGGSDSNKGKSKKWRKILQFPHISQCINLKDKL 49


>BT011134-1|AAR82801.1|  561|Drosophila melanogaster HL01545p
           protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 22/85 (25%), Positives = 36/85 (42%)
 Frame = -1

Query: 426 ISSSVTDFIEDPPRSKNPPMRPLCRPPALRDSAHQCTHQDRTARLTHKSNFTQTLLSTQD 247
           +SSS T       + ++PP R   R   LR  A Q   +  ++      N    +++ Q 
Sbjct: 131 VSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQF 190

Query: 246 NVWVIGNTAAGDKHATLTTIKGVVE 172
           +     N AA D  ++ TT   VV+
Sbjct: 191 SDTNSANPAAIDNPSSTTTATTVVQ 215


>AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA
            protein.
          Length = 2228

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 22/85 (25%), Positives = 36/85 (42%)
 Frame = -1

Query: 426  ISSSVTDFIEDPPRSKNPPMRPLCRPPALRDSAHQCTHQDRTARLTHKSNFTQTLLSTQD 247
            +SSS T       + ++PP R   R   LR  A Q   +  ++      N    +++ Q 
Sbjct: 1798 VSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQF 1857

Query: 246  NVWVIGNTAAGDKHATLTTIKGVVE 172
            +     N AA D  ++ TT   VV+
Sbjct: 1858 SDTNSANPAAIDNPSSTTTATTVVQ 1882


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,480,787
Number of Sequences: 53049
Number of extensions: 710792
Number of successful extensions: 1851
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1844
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)