Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1960
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 327  HQCTHQDRTARLTHKSNFTQTLLSTQDNVWVIGNTAAGDKHATL 196
            H C  Q+RT +    S+     L T+ + W  G     +KH T+
Sbjct: 1648 HDCIRQERTQQRNVISDSESGRLDTEMSTW--GYHHNVNKHCTI 1689


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
 Frame = -1

Query: 309 DRTARLTHKSNFTQT-----LLSTQDNVWVIGNTAAGDKHATLTTIKGVVEP*LPCQSRR 145
           DR   +T   N+ Q      +L+T   VW++    +    A        +EP  PCQ  R
Sbjct: 133 DRYWAITDPINYAQKRTLKRVLATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQLTR 192


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
 Frame = -1

Query: 309 DRTARLTHKSNFTQT-----LLSTQDNVWVIGNTAAGDKHATLTTIKGVVEP*LPCQSRR 145
           DR   +T   N+ Q      +L+T   VW++    +    A        +EP  PCQ  R
Sbjct: 133 DRYWAITDPINYAQKRTLKRVLATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQLTR 192


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 56  SNYANYERHEHTRYNTK 6
           +NY NY  + +  YN K
Sbjct: 328 NNYNNYNNNNYNNYNKK 344



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 56  SNYANYERHEHTRYN 12
           SNY NY  + +  YN
Sbjct: 325 SNYNNYNNYNNNNYN 339


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
 Frame = -1

Query: 309 DRTARLTHKSNFTQT-----LLSTQDNVWVIGNTAAGDKHATLTTIKGVVEP*LPCQSRR 145
           DR   +T   N+ Q      +L+T   VW++    +    A        +EP  PCQ  R
Sbjct: 133 DRYWAITDPINYAQKRTLKRVLATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQLTR 192


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 240 WVIGNTAAGDKHATLTT 190
           W + +TAA D+  +LTT
Sbjct: 216 WSLDSTAASDEDISLTT 232


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 301 STTNPQVKLYTNTTKHTG*RLGDRKHGRGR*TRNVDDDQ 185
           +T+N    + T TT     RL  R+   G    + DDD+
Sbjct: 246 ATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDDE 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,721
Number of Sequences: 438
Number of extensions: 4839
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)