Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1958
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical... 44 1e-04
AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacet... 44 1e-04
Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical pr... 31 0.51
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 27 8.3
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 8.3
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 8.3
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 8.3
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 8.3
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.3
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.3
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 8.3
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.3
>AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical
protein Y46G5A.21 protein.
Length = 671
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +1
Query: 235 FVDILEPRRTESDTFRYMTRRWDLV---KTMALDKIYSPEDLKDFVAKSVYLDNFIDAES 405
+ + LE + + F+++T + K K S +++ V +S + + I E+
Sbjct: 16 YENFLEHLKNKGGPFKFVTATKNFPVGSKVGTAPKTRSLAEIRKSVLESPRVKSVISEET 75
Query: 406 TRTGVSKTELHKEVLNYLEEMGLDKKLHVIRWMGVFFLKISFMMKIKLFVNEPKVLQLKL 585
R S + KE L+EM L+ +R G K + ++VNE K+L+++
Sbjct: 76 LRRKCSPDLVRKEAEEILDEMSHTFNLYNVRSFGYAVCKAMEKLYDGIYVNEKKLLEIRE 135
Query: 586 TMGRNPVLFLPTH 624
++ V+F+P+H
Sbjct: 136 RSKKDCVIFMPSH 148
>AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacetone
phosphate acyltransferaseprotein.
Length = 671
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +1
Query: 235 FVDILEPRRTESDTFRYMTRRWDLV---KTMALDKIYSPEDLKDFVAKSVYLDNFIDAES 405
+ + LE + + F+++T + K K S +++ V +S + + I E+
Sbjct: 16 YENFLEHLKNKGGPFKFVTATKNFPVGSKVGTAPKTRSLAEIRKSVLESPRVKSVISEET 75
Query: 406 TRTGVSKTELHKEVLNYLEEMGLDKKLHVIRWMGVFFLKISFMMKIKLFVNEPKVLQLKL 585
R S + KE L+EM L+ +R G K + ++VNE K+L+++
Sbjct: 76 LRRKCSPDLVRKEAEEILDEMSHTFNLYNVRSFGYAVCKAMEKLYDGIYVNEKKLLEIRE 135
Query: 586 TMGRNPVLFLPTH 624
++ V+F+P+H
Sbjct: 136 RSKKDCVIFMPSH 148
>Z73911-3|CAC42339.1| 324|Caenorhabditis elegans Hypothetical
protein T12A7.7 protein.
Length = 324
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 611 NNTGFLPIVNFSWSTFGSLTNSLIFIMNEILRKKTPIHLMTCNF 480
NN FL + F W+ G+ + I ++N+ R T HL C F
Sbjct: 262 NNVIFLTLGLFIWALHGAACTAGIIVVNKPFRLATKNHLKYCRF 305
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 626 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 684
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 386 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 444
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 468 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 526
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 626 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 684
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 386 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 444
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 468 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 526
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 131 FTSFCLLIKYIKVVSTRCIKFVSSVENSK*VRK*ISLI 244
FT+ C+ +K +KVV+ K+ S +S+ ++K LI
Sbjct: 587 FTTTCVEVKNVKVVTCNQCKYTSQFASSECIKKEHKLI 624
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 KSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEM---GLDKKLHVIRWMGVFFLKISFM 534
++ YLD + R GV LHKE LE M + I W+ V K++ M
Sbjct: 499 RTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTM 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,121,897
Number of Sequences: 27780
Number of extensions: 252205
Number of successful extensions: 586
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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