Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1955
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 40 0.012
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 40 0.012
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 40 0.012
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 40 0.012
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 40 0.012
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 40 0.012
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 40 0.012
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 40 0.012
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 40 0.012
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 40 0.012
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 40 0.012
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 40 0.012
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 40 0.012
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 40 0.012
BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated ph... 35 0.33
BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein. 35 0.33
BC031106-1|AAH31106.1| 335|Homo sapiens ARPP-21 protein protein. 35 0.33
AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens ... 33 0.77
AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens ... 33 0.77
AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein. 33 0.77
BC108676-1|AAI08677.1| 445|Homo sapiens hypothetical protein LO... 33 1.4
BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein. 33 1.4
AK131284-1|BAD18458.1| 445|Homo sapiens protein ( Homo sapiens ... 33 1.4
AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein. 33 1.4
U46023-1|AAC50551.1| 701|Homo sapiens protein ( Human Xq28 mRNA... 32 1.8
BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein. 32 1.8
Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosoph... 31 3.1
Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3 (Drosoph... 31 3.1
EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. 31 3.1
DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPas... 31 3.1
BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. 31 3.1
AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kin... 31 3.1
AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kin... 31 3.1
AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kin... 31 3.1
AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting prote... 31 3.1
AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2 pr... 31 3.1
AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kin... 31 3.1
AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein pr... 31 3.1
AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens ... 31 3.1
AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) hom... 31 3.1
AB047534-1|BAB63255.1| 159|Homo sapiens PER3 protein. 31 3.1
AB047533-1|BAB63254.1| 159|Homo sapiens PER3 protein. 31 3.1
AB047532-1|BAB63253.1| 159|Homo sapiens PER3 protein. 31 3.1
AB047531-1|BAB63252.1| 159|Homo sapiens PER3 protein. 31 3.1
AB047530-1|BAB63251.1| 159|Homo sapiens PER3 protein. 31 3.1
U66615-1|AAC50693.1| 1104|Homo sapiens SWI/SNF complex 155 KDa s... 30 7.2
BC117213-1|AAI17214.1| 1105|Homo sapiens SWI/SNF related, matrix... 30 7.2
BC113465-1|AAI13466.1| 1105|Homo sapiens SWI/SNF related, matrix... 30 7.2
BC050564-1|AAH50564.1| 1105|Homo sapiens SWI/SNF related, matrix... 30 7.2
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 30 7.2
AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 30 7.2
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 30 7.2
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 30 9.5
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 30 9.5
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 30 9.5
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 30 9.5
AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein. 30 9.5
AB023209-1|BAA76836.1| 772|Homo sapiens KIAA0992 protein protein. 30 9.5
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 674 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 709
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 674 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 709
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1829
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1824
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1804
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1829
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1824
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1804
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1829
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1824
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1804
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1829
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1824
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 39.5 bits (88), Expect = 0.012
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 319 PPTYVP---STQMPPFPIYVIPFPLPIVPSPGSCPC 417
PPT+ P ST PP P + PFP P+ P P S PC
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPC 1827
>BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated
phosphoprotein, 21 kD protein.
Length = 812
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 376 FPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSHPANGQ--SQGYAPYGIIGFIPVVFVP 549
+P ++P P P Y++ T S P + Q +P G + P +P
Sbjct: 578 YPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMP 637
Query: 550 --YCPGNGSAMNTAQQNFP*AVPVQYNCAQCQANRDVYRFAG 669
Y P +T QQ P A PVQYN + Q + AG
Sbjct: 638 VYYYPSGQYPTSTTQQYRPMA-PVQYNAQRSQQMPQAAQQAG 678
>BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein.
Length = 793
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 376 FPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSHPANGQ--SQGYAPYGIIGFIPVVFVP 549
+P ++P P P Y++ T S P + Q +P G + P +P
Sbjct: 559 YPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMP 618
Query: 550 --YCPGNGSAMNTAQQNFP*AVPVQYNCAQCQANRDVYRFAG 669
Y P +T QQ P A PVQYN + Q + AG
Sbjct: 619 VYYYPSGQYPTSTTQQYRPMA-PVQYNAQRSQQMPQAAQQAG 659
>BC031106-1|AAH31106.1| 335|Homo sapiens ARPP-21 protein protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +1
Query: 376 FPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSHPANGQ--SQGYAPYGIIGFIPVVFVP 549
+P ++P P P Y++ T S P + Q +P G + P +P
Sbjct: 101 YPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMP 160
Query: 550 --YCPGNGSAMNTAQQNFP*AVPVQYNCAQCQANRDVYRFAG 669
Y P +T QQ P A PVQYN + Q + AG
Sbjct: 161 VYYYPSGQYPTSTTQQYRPMA-PVQYNAQRSQQMPQAAQQAG 201
>AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens
cDNA FLJ16526 fis, clone OCBBF2006987. ).
Length = 892
Score = 33.5 bits (73), Expect = 0.77
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 295 VSSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASS 474
V T + PP+ + P FP +V+ P SPGS Y +PG TN ++
Sbjct: 514 VQPDTSLTPPSMGGAYHSPGFPGHVMKVPRENHCSPGS--SYQQSPGEMQLNTN-YESLQ 570
Query: 475 HPANGQSQGYAPYGIIGFIP 534
+PA YA + I F P
Sbjct: 571 NPAEFYDNYYAQHSIHNFQP 590
>AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ45877 fis, clone OCBBF3008835. ).
Length = 938
Score = 33.5 bits (73), Expect = 0.77
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 295 VSSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASS 474
V T + PP+ + P FP +V+ P SPGS Y +PG TN ++
Sbjct: 338 VQPDTSLTPPSMGGAYHSPGFPGHVMKVPRENHCSPGS--SYQQSPGEMQLNTN-YESLQ 394
Query: 475 HPANGQSQGYAPYGIIGFIP 534
+PA YA + I F P
Sbjct: 395 NPAEFYDNYYAQHSIHNFQP 414
>AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.77
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 295 VSSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASS 474
V T + PP+ + P FP +V+ P SPGS Y +PG TN ++
Sbjct: 482 VQPDTSLTPPSMGGAYHSPGFPGHVMKVPRENHCSPGS--SYQQSPGEMQLNTN-YESLQ 538
Query: 475 HPANGQSQGYAPYGIIGFIP 534
+PA YA + I F P
Sbjct: 539 NPAEFYDNYYAQHSIHNFQP 558
>BC108676-1|AAI08677.1| 445|Homo sapiens hypothetical protein
LOC392636 protein.
Length = 445
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 243 YGLSALPWISWWTWLSGLIGID 178
Y L LPW S WTW S +G+D
Sbjct: 104 YRLFNLPWDSPWTWYSAFLGVD 125
>BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein.
Length = 443
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 319 PPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATN 456
PP P PP P P P P P P S N NN T N
Sbjct: 94 PPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPAN 139
>AK131284-1|BAD18458.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ16237 fis, clone HCASM2002754. ).
Length = 445
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 243 YGLSALPWISWWTWLSGLIGID 178
Y L LPW S WTW S +G+D
Sbjct: 104 YRLFNLPWDSPWTWYSAFLGVD 125
>AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 319 PPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATN 456
PP P PP P P P P P P S N NN T N
Sbjct: 94 PPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPAN 139
>U46023-1|AAC50551.1| 701|Homo sapiens protein ( Human Xq28 mRNA,
complete cds. ).
Length = 701
Score = 32.3 bits (70), Expect = 1.8
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Frame = +1
Query: 310 GVQPPTY-VPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNP-------GNNGTATNEMQ 465
G+ PP+ VPS Q PP P+ P P P P C N G+ + M
Sbjct: 262 GLSPPSRPVPSLQPPPLPL--PPPPPPFSPQSLMVSCMSSNTLSGSTLRGSPNALLSSMT 319
Query: 466 ASSHPANGQSQGYAP 510
+SS+ A G + YAP
Sbjct: 320 SSSNAALGPAMPYAP 334
>BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein.
Length = 504
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 513 RYYRIHTCCFRSLLSRKWECDEHCTTKLPLSSTGAIQLCPMSGQSRCLQIRRP 671
R++ CC S LS W + T L S + +C ++G+ RCL + P
Sbjct: 401 RWWMNAACCPASCLSPAWTGCQPATAWLAACSPSSPFVCSLAGRPRCLAVLPP 453
>Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1201
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 775 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 811
>Z98884-4|CAI21435.1| 1210|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1210
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 783 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 819
>EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein.
Length = 1201
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 775 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 811
>DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPase
long form protein.
Length = 578
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 488 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 542
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 543 AVNGMSRG 550
>BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein.
Length = 1210
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 783 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 819
>AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kinase
isoform 3 protein.
Length = 352
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 262 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 316
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 317 AVNGMSRG 324
>AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kinase
isoform 4 protein.
Length = 441
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 351 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 405
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 406 AVNGMSRG 413
>AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kinase
isoform 5 protein.
Length = 495
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 405 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 459
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 460 AVNGMSRG 467
>AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting protein
13 protein.
Length = 1201
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 775 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 811
>AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2
protein.
Length = 545
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 455 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 509
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 510 AVNGMSRG 517
>AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kinase
protein.
Length = 578
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 488 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 542
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 543 AVNGMSRG 550
>AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein
protein.
Length = 1201
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 775 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 811
>AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens
cDNA FLJ20335 fis, clone HEP11429. ).
Length = 649
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCPCYLLNPGNNGTATNEMQASSH 477
S+G+G P PS+ PP + P P P P P L P + Q SS
Sbjct: 488 SAGSGASSPLTSPSSPTPPSTSGISALPPP--PPPPPPPAAPLPPASTEAPA---QLSSQ 542
Query: 478 PANGQSQG 501
NG S+G
Sbjct: 543 AVNGMSRG 550
>AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila)
homolog 3 hPER3 protein.
Length = 1233
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 806 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 842
>AB047534-1|BAB63255.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 52 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 88
>AB047533-1|BAB63254.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 52 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 88
>AB047532-1|BAB63253.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 52 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 88
>AB047531-1|BAB63252.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 52 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 88
>AB047530-1|BAB63251.1| 159|Homo sapiens PER3 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 SSGTGVQPPTYVPSTQMPPFPIYVIP-FPLPIVPSPG 405
+S PT+ P+ +P Y++P FPLP SPG
Sbjct: 52 ASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPG 88
>U66615-1|AAC50693.1| 1104|Homo sapiens SWI/SNF complex 155 KDa
subunit protein.
Length = 1104
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 SSGTGVQP------PTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP-CYLLNPGNN--GTA 450
S G G+ P P +P Q PP+P+ P P P PG P + PG + G
Sbjct: 973 SGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRM 1032
Query: 451 TNEMQASSHPA 483
+ A+ HP+
Sbjct: 1033 IPTVAANIHPS 1043
>BC117213-1|AAI17214.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 SSGTGVQP------PTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP-CYLLNPGNN--GTA 450
S G G+ P P +P Q PP+P+ P P P PG P + PG + G
Sbjct: 974 SGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRM 1033
Query: 451 TNEMQASSHPA 483
+ A+ HP+
Sbjct: 1034 IPTVAANIHPS 1044
>BC113465-1|AAI13466.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 SSGTGVQP------PTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP-CYLLNPGNN--GTA 450
S G G+ P P +P Q PP+P+ P P P PG P + PG + G
Sbjct: 974 SGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRM 1033
Query: 451 TNEMQASSHPA 483
+ A+ HP+
Sbjct: 1034 IPTVAANIHPS 1044
>BC050564-1|AAH50564.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 SSGTGVQP------PTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP-CYLLNPGNN--GTA 450
S G G+ P P +P Q PP+P+ P P P PG P + PG + G
Sbjct: 974 SGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRM 1033
Query: 451 TNEMQASSHPA 483
+ A+ HP+
Sbjct: 1034 IPTVAANIHPS 1044
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPP----FPIYVIPFPLPIVPSPGSCPCYLLNPG 435
G PP +VP +QMPP P V+P LP P + P + PG
Sbjct: 340 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPG 387
>AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ33731 fis, clone BRAWH2017685, moderately
similar to Mus musculus mRNA for nuclear protein ZAP. ).
Length = 723
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPP----FPIYVIPFPLPIVPSPGSCPCYLLNPG 435
G PP +VP +QMPP P V+P LP P + P + PG
Sbjct: 81 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPG 128
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPP----FPIYVIPFPLPIVPSPGSCPCYLLNPG 435
G PP +VP +QMPP P V+P LP P + P + PG
Sbjct: 138 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPG 185
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFP----IYVIPFPLPIVPSPGS 408
G G+ PP +P +PP P + + P P P +P PG+
Sbjct: 802 GVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGT 840
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
G G+ PP +P +PP P +P P +P P P
Sbjct: 813 GAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 849
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
G G+ PP +P +PP P +P P +P P P
Sbjct: 1346 GAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1382
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
G G+ PP +P +PP P +P P +P P P
Sbjct: 1346 GAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1382
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
G G+ PP +P +PP P +P P +P P P
Sbjct: 1346 GAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1382
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 304 GTGVQPPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
G G+ PP +P +PP P +P P +P P P
Sbjct: 1346 GAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLP 1382
>AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.
Length = 1560
Score = 29.9 bits (64), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 319 PPTYVPSTQMPPFPIYVIPFPLPIVPSPGSCP 414
P Y QMP + ++P P+P++P+ G+ P
Sbjct: 850 PMVYPGMIQMPAYQPGMVPAPMPMMPAMGTVP 881
>AB023209-1|BAA76836.1| 772|Homo sapiens KIAA0992 protein protein.
Length = 772
Score = 29.9 bits (64), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 319 PPTYVPSTQMPPFPIYVIPFPLPIVPSPG 405
PP + P+ P ++ +P P P +PSPG
Sbjct: 193 PPVFSPTAAFPVPDVFPLPPPPPPLPSPG 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,733,361
Number of Sequences: 237096
Number of extensions: 2340116
Number of successful extensions: 12213
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 11310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12059
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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