Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1952
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL390241-5|CAI13550.1| 1127|Homo sapiens tripartite motif-contai... 29 7.9
AL390241-4|CAI13551.1| 1110|Homo sapiens tripartite motif-contai... 29 7.9
AL035410-4|CAI21896.1| 1127|Homo sapiens tripartite motif-contai... 29 7.9
AL035410-3|CAI21897.1| 1110|Homo sapiens tripartite motif-contai... 29 7.9
AJ132948-1|CAB55313.1| 1052|Homo sapiens rfg7 protein protein. 29 7.9
AF220137-1|AAG53510.1| 1110|Homo sapiens tripartite motif protei... 29 7.9
AF220136-1|AAG53509.1| 1127|Homo sapiens tripartite motif protei... 29 7.9
AF119043-1|AAD17259.1| 1120|Homo sapiens transcriptional interme... 29 7.9
AB029036-1|BAA83065.1| 1131|Homo sapiens KIAA1113 protein protein. 29 7.9
>AL390241-5|CAI13550.1| 1127|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1127
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AL390241-4|CAI13551.1| 1110|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1110
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AL035410-4|CAI21896.1| 1127|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1127
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AL035410-3|CAI21897.1| 1110|Homo sapiens tripartite
motif-containing 33 protein.
Length = 1110
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AJ132948-1|CAB55313.1| 1052|Homo sapiens rfg7 protein protein.
Length = 1052
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 97 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 147
>AF220137-1|AAG53510.1| 1110|Homo sapiens tripartite motif protein
TRIM33 beta protein.
Length = 1110
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AF220136-1|AAG53509.1| 1127|Homo sapiens tripartite motif protein
TRIM33 alpha protein.
Length = 1127
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AF119043-1|AAD17259.1| 1120|Homo sapiens transcriptional
intermediary factor 1 gamma protein.
Length = 1120
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 172 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 222
>AB029036-1|BAA83065.1| 1131|Homo sapiens KIAA1113 protein protein.
Length = 1131
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 141 NLEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHFSGVTISKTDNLSKKMCQSCLD 317
++++ +I C +C +E +I + DN ++ E S +D S+++C SC D
Sbjct: 176 DIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSE--------APSSSDEKSEQVCTSCED 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,530,968
Number of Sequences: 237096
Number of extensions: 1010861
Number of successful extensions: 1612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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