Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1949
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 79 2e-15
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 71 9e-13
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 56 3e-08
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 38 0.006
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 34 0.092
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 30 1.5
AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical ... 29 2.6
AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm rece... 29 2.6
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 29 4.6
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 6.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 6.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 6.0
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 79.4 bits (187), Expect = 2e-15
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Frame = +3
Query: 255 RVVGGMGTNVNAFPWLARLIYQ--KSFGCGASLINDRYVVSAAHCLK-GFMWFMFRVKFG 425
RVVGG T AFPW A L + K+ CGAS+++ ++++AAHC + + V G
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG 85
Query: 426 EHDRCDRSHTPETRYVVKVIVHNFNLKELSNDISLIQLSRP-IGYSHAIRPVCLPKTPDS 602
+ D + Y+ ++ + S+DI+++++ P I ++ +P+CLP + D
Sbjct: 86 DWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLP-SKDF 144
Query: 603 LYT-GAEAIVAGWGATGETGNWSCMLLKAELPILSNEECQGTS 728
+YT G + +V+GWG+ G ++ L A +PI++ +C +S
Sbjct: 145 VYTPGRQCVVSGWGSMGL--RYAERLQAALIPIINRFDCVNSS 185
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 70.9 bits (166), Expect = 9e-13
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = +3
Query: 255 RVVGGMGTNVNAFPWLARLIYQKSFG-CGASLINDRYVVSAAHCL-KGFMWFMFRVKFGE 428
R++GG ++ +++PW +L+ + CG SLI+ +V++AAHC K + V+ G
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGG 116
Query: 429 HDRCDRSHTPETRYVVKVIVHN-FNLKELSN-DISLIQLSRPIGYSHAIRPVCLPKTPDS 602
H RS + V V +H +N+ S+ D +++++ P+ S RP+CLP P
Sbjct: 117 H----RSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLP-- 170
Query: 603 LYTGAEAIVAGWGATGETGNWSCMLLK-AELPILSNEEC 716
+V GWG+T E + S L+ +P+LS C
Sbjct: 171 AVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFC 209
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Frame = +3
Query: 255 RVVGGMGTNVNAFPWLARLIYQKSFG----CGASLINDRYVVSAAHCLKGFMWFMFRVKF 422
R++GG + A W+A+L+ G CGA++I+D ++V+AAHC F
Sbjct: 37 RIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVR 95
Query: 423 GEHDRCDRSHTPETRYVVKVIVHNFNLKELSNDISLIQLSRPIGYSHAIRPVCLPKTPDS 602
+ +RS + + Y I +N + NDI+L+++S + I+PVCL
Sbjct: 96 EPKNNRERSFSVKEAY----IHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSK 150
Query: 603 LYTG-AEAIVAGWGAT-GETGNWSCMLLKAE------LPILSNEECQGT 725
L +V G+G T GE + L+ ++ +PI+S+++C T
Sbjct: 151 LLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKT 199
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +3
Query: 417 KFGEHDRCDRSHTPETRYVVKVIVHNFNLKEL--SNDISLIQLSRPIGYSHAIRPVCLPK 590
K+ RC +S + ++ F +D +++++ + I +S +RP+CLP+
Sbjct: 108 KYPNDPRCKKSDVIHNKVRAVLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPICLPR 167
Query: 591 TPDSLYTGAEAIVAGWGAT-GETGNWSCMLLKAELPILSNEECQ 719
P+ YT + A V GWG E+G L E+P+ + +C+
Sbjct: 168 -PNMYYTKSLA-VPGWGRIFNESGP-----LIHEIPMRIDRDCK 204
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 34.3 bits (75), Expect = 0.092
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 504 KELSNDISLIQLSRPIGYSHAIRPVCLPKTP 596
+E NDI++ +L PI +S I P CLP P
Sbjct: 117 RESFNDIAVFELEEPIEFSKDIFPACLPSAP 147
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 177 SNIRSQYQGQLPPCQDCHCGERNEKPRVVGGMGTNVNAFPWLARLIYQKSFGCGASLIND 356
S +S + +PP D H N +P GT+ + P +R K+ G G+ ++
Sbjct: 592 SKPKSSFGSAVPPKPDHHTSYDNGRPLATRSFGTSTPS-PITSRSRSPKTPGVGSKIVRS 650
Query: 357 RYVVSAAH 380
VVS+++
Sbjct: 651 TQVVSSSY 658
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 507 ELSNDISLIQLSRPIGYSHAIRPVCLPKTPD-SLYTGAEAIVAGWGA 644
E NDI +++L I CLP P+ ++ +GA GWG+
Sbjct: 173 EQGNDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGS 219
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 264 GGMGTNVNAFPWLARLIYQKSFG-----CGASLINDRYVVSAAHCLKGFMWFMFRVKFGE 428
G G + PW ++ + G CG +LI ++V++AAHC F+ FG
Sbjct: 34 GNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC--------FQKHFGA 85
Query: 429 HDRCDRSHTPETRYVVKVIVHN 494
++ RY +++N
Sbjct: 86 KKEGGEENSMSGRYCESWVIYN 107
>AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical
protein C24D10.4 protein.
Length = 233
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 673 MQDQFPVSPVAPHPATIASAPVYKLSGVLGRHTGRM 566
M DQ +PVAP P T +L+ +LG GR+
Sbjct: 1 MSDQEETAPVAPPPLTAEERRQRRLAKILGNSEGRI 36
>AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm
receptor protein 131 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 84 LLVFCCLLRVASGTPTPRYINEGGVSLSEDSSNIRSQ 194
L++ CCL V G T + +N+ G SLS + + Q
Sbjct: 209 LMIVCCLTIVFCGVKTYKKMNDSGNSLSNRTKELNRQ 245
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 441 DRSHTPETR----YVVKVIVHNFNLKELSNDISLIQLSRPIGYSHAIRPVCLPKTPDSLY 608
DRS TR V +VIV N S + +++L +P+ + +I PVC+ P
Sbjct: 135 DRSKFDMTRKFQDLVRRVIVINGCPDVNSAKVLILELKKPLELNPSIWPVCISNDPQLFD 194
Query: 609 TGAEAIVAGWGATG 650
++ V+G A G
Sbjct: 195 RSSDFSVSGIDAKG 208
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein
K07E12.1b protein.
Length = 12268
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 114 ASGTPTPRYINEGGVSLSEDSSNIRSQYQGQLPPCQ 221
A+G P NE G+ L DSS + G+L P +
Sbjct: 10458 AAGKPIYSVFNEDGIQLPTDSSGYAIGHDGELVPTE 10493
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 114 ASGTPTPRYINEGGVSLSEDSSNIRSQYQGQLPPCQ 221
A+G P NE G+ L DSS + G+L P +
Sbjct: 10503 AAGKPIYSVFNEDGIQLPTDSSGYAIGHDGELVPTE 10538
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 114 ASGTPTPRYINEGGVSLSEDSSNIRSQYQGQLPPCQ 221
A+G P NE G+ L DSS + G+L P +
Sbjct: 10503 AAGKPIYSVFNEDGIQLPTDSSGYAIGHDGELVPTE 10538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,351,959
Number of Sequences: 27780
Number of extensions: 369055
Number of successful extensions: 1008
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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