Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1948
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050528-1|AAH50528.1| 300|Homo sapiens RNA binding motif prote... 219 7e-57
BC039740-1|AAH39740.1| 300|Homo sapiens RNA binding motif prote... 219 7e-57
BC028230-1|AAH28230.1| 300|Homo sapiens RNA binding motif prote... 219 7e-57
AK027469-1|BAB55134.1| 300|Homo sapiens protein ( Homo sapiens ... 219 7e-57
AF251062-1|AAK34952.1| 300|Homo sapiens RNA binding protein pro... 219 7e-57
BC015965-1|AAH15965.1| 127|Homo sapiens Unknown (protein for IM... 185 2e-46
X62468-1|CAA44325.1| 144|Homo sapiens interferon-gamma protein. 31 3.4
X13274-1|CAA31639.1| 166|Homo sapiens protein ( Human mRNA for ... 31 3.4
X01992-1|CAA26022.1| 166|Homo sapiens interferon precursor prot... 31 3.4
V00543-1|CAA23804.1| 166|Homo sapiens protein ( Human messenger... 31 3.4
J00219-1|AAB59534.1| 166|Homo sapiens interferon-gamma protein. 31 3.4
BC070256-1|AAH70256.1| 166|Homo sapiens interferon, gamma protein. 31 3.4
AY255839-1|AAP20100.1| 144|Homo sapiens interferon gamma protein. 31 3.4
AY255837-1|AAP20098.1| 166|Homo sapiens interferon gamma protein. 31 3.4
AF375790-1|AAK53058.1| 166|Homo sapiens interferon gamma protein. 31 3.4
X62474-1|CAA44331.1| 133|Homo sapiens interferon gamma variant ... 31 4.5
X62473-1|CAA44330.1| 133|Homo sapiens interferon-gamma variant ... 31 4.5
X62469-1|CAA44326.1| 134|Homo sapiens interferon-gamma variant ... 31 4.5
EF173872-1|ABM53145.1| 82|Homo sapiens interferon gamma protein. 30 7.8
>BC050528-1|AAH50528.1| 300|Homo sapiens RNA binding motif protein
13 protein.
Length = 300
Score = 219 bits (536), Expect = 7e-57
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQYL
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYL 120
Query: 476 IRMRKLKLRRVKELVPIQRKIEKTGEKKRRE 568
IR+RKL L+R ++LVP+ +K+E+ EK+R E
Sbjct: 121 IRIRKLTLKRQRKLVPLSKKVERR-EKRREE 150
Score = 63.3 bits (147), Expect = 9e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 570 ALVAARIDNAIEKQLLERLKKGTYNDIYNFPQMAFDAAL 686
AL+AA++DNAIEK+LLERLK+ TY DIYNFP AFD AL
Sbjct: 152 ALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKAL 190
>BC039740-1|AAH39740.1| 300|Homo sapiens RNA binding motif protein
13 protein.
Length = 300
Score = 219 bits (536), Expect = 7e-57
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQYL
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYL 120
Query: 476 IRMRKLKLRRVKELVPIQRKIEKTGEKKRRE 568
IR+RKL L+R ++LVP+ +K+E+ EK+R E
Sbjct: 121 IRIRKLTLKRQRKLVPLSKKVERR-EKRREE 150
Score = 63.3 bits (147), Expect = 9e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 570 ALVAARIDNAIEKQLLERLKKGTYNDIYNFPQMAFDAAL 686
AL+AA++DNAIEK+LLERLK+ TY DIYNFP AFD AL
Sbjct: 152 ALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKAL 190
>BC028230-1|AAH28230.1| 300|Homo sapiens RNA binding motif protein
13 protein.
Length = 300
Score = 219 bits (536), Expect = 7e-57
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQYL
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYL 120
Query: 476 IRMRKLKLRRVKELVPIQRKIEKTGEKKRRE 568
IR+RKL L+R ++LVP+ +K+E+ EK+R E
Sbjct: 121 IRIRKLTLKRQRKLVPLSKKVERR-EKRREE 150
Score = 63.3 bits (147), Expect = 9e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 570 ALVAARIDNAIEKQLLERLKKGTYNDIYNFPQMAFDAAL 686
AL+AA++DNAIEK+LLERLK+ TY DIYNFP AFD AL
Sbjct: 152 ALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKAL 190
>AK027469-1|BAB55134.1| 300|Homo sapiens protein ( Homo sapiens
cDNA FLJ14563 fis, clone NT2RM4000215, weakly similar to
MAK16 PROTEIN. ).
Length = 300
Score = 219 bits (536), Expect = 7e-57
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQYL
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYL 120
Query: 476 IRMRKLKLRRVKELVPIQRKIEKTGEKKRRE 568
IR+RKL L+R ++LVP+ +K+E+ EK+R E
Sbjct: 121 IRIRKLTLKRQRKLVPLSKKVERR-EKRREE 150
Score = 63.3 bits (147), Expect = 9e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 570 ALVAARIDNAIEKQLLERLKKGTYNDIYNFPQMAFDAAL 686
AL+AA++DNAIEK+LLERLK+ TY DIYNFP AFD AL
Sbjct: 152 ALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKAL 190
>AF251062-1|AAK34952.1| 300|Homo sapiens RNA binding protein
protein.
Length = 300
Score = 219 bits (536), Expect = 7e-57
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQYL
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYL 120
Query: 476 IRMRKLKLRRVKELVPIQRKIEKTGEKKRRE 568
IR+RKL L+R ++LVP+ +K+E+ EK+R E
Sbjct: 121 IRIRKLTLKRQRKLVPLSKKVERR-EKRREE 150
Score = 63.3 bits (147), Expect = 9e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 570 ALVAARIDNAIEKQLLERLKKGTYNDIYNFPQMAFDAAL 686
AL+AA++DNAIEK+LLERLK+ TY DIYNFP AFD AL
Sbjct: 152 ALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKAL 190
>BC015965-1|AAH15965.1| 127|Homo sapiens Unknown (protein for
IMAGE:4045270) protein.
Length = 127
Score = 185 bits (450), Expect = 2e-46
Identities = 82/127 (64%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Frame = +2
Query: 119 MQHDDVVWAII-NKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGI 295
MQ DDV+W + NK CS K+ TKTQ FCRNEY+LTGLC+RSSCPLANS+YATI+EE G
Sbjct: 1 MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQ 60
Query: 296 IYLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 475
YLYMK ER FP + WE+V+LS+N+EKA+ QI+ENL+YWP FI+ KCKQRF KITQ
Sbjct: 61 CYLYMKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQKK 120
Query: 476 IRMRKLK 496
+ +K K
Sbjct: 121 KKKKKKK 127
>X62468-1|CAA44325.1| 144|Homo sapiens interferon-gamma protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 51 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 108
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 109 KAIHELIQVMAELSPAAKTGKRKRSQ 134
>X13274-1|CAA31639.1| 166|Homo sapiens protein ( Human mRNA for
interferon IFN-gamma. ).
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>X01992-1|CAA26022.1| 166|Homo sapiens interferon precursor
protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>V00543-1|CAA23804.1| 166|Homo sapiens protein ( Human messenger
RNA for immune (gamma) interferon. ).
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>J00219-1|AAB59534.1| 166|Homo sapiens interferon-gamma protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>BC070256-1|AAH70256.1| 166|Homo sapiens interferon, gamma protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>AY255839-1|AAP20100.1| 144|Homo sapiens interferon gamma protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 51 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 108
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 109 KAIHELIQVMAELSPAAKTGKRKRSQ 134
>AY255837-1|AAP20098.1| 166|Homo sapiens interferon gamma protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>AF375790-1|AAK53058.1| 166|Homo sapiens interferon gamma protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 73 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 130
Query: 500 RRVKELVPIQRKIE---KTGEKKRRE 568
+ + EL+ + ++ KTG++KR +
Sbjct: 131 KAIHELIQVMAELSPAAKTGKRKRSQ 156
>X62474-1|CAA44331.1| 133|Homo sapiens interferon gamma variant
protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 51 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 108
Query: 500 RRVKELVPIQRKIE---KTGEKKR 562
+ + EL+ + ++ KTG++KR
Sbjct: 109 KAIHELIQVMAELSPAAKTGKRKR 132
>X62473-1|CAA44330.1| 133|Homo sapiens interferon-gamma variant
protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 51 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 108
Query: 500 RRVKELVPIQRKIE---KTGEKKR 562
+ + EL+ + ++ KTG++KR
Sbjct: 109 KAIHELIQVMAELSPAAKTGKRKR 132
>X62469-1|CAA44326.1| 134|Homo sapiens interferon-gamma variant
protein.
Length = 134
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +2
Query: 326 IMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKL 499
+ F K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++
Sbjct: 51 VSFYFKLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQR 108
Query: 500 RRVKELVPIQRKIE---KTGEKKR 562
+ + EL+ + ++ KTG++KR
Sbjct: 109 KAIHELIQVMAELSPAAKTGKRKR 132
>EF173872-1|ABM53145.1| 82|Homo sapiens interferon gamma protein.
Length = 82
Score = 30.3 bits (65), Expect = 7.8
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +2
Query: 341 KQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQR--FVKITQYLIRMRKLKLRRVKE 514
K ++ K ++ +K++ I E++ F + K+R F K+T Y + ++ + + E
Sbjct: 2 KLFKNFKDDQSIQKSVETIKEDMNV--KFFNSNKKKRDDFEKLTNYSVTDLNVQRKAIHE 59
Query: 515 LVPIQRKIE---KTGEKKRRE 568
L+ + ++ KTG++KR +
Sbjct: 60 LIQVMAELSPAAKTGKRKRSQ 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,410,967
Number of Sequences: 237096
Number of extensions: 1961246
Number of successful extensions: 8611
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8611
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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