Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1947
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003567-1|AAO39571.1|  258|Drosophila melanogaster LD45309p pro...    27   9.2  
AY069322-1|AAL39467.1|  263|Drosophila melanogaster LD03819p pro...    27   9.2  
AE014297-4818|AAN14293.1|  212|Drosophila melanogaster CG1971-PB...    27   9.2  
AE014297-4817|AAF57204.1|  263|Drosophila melanogaster CG1971-PA...    27   9.2  

>BT003567-1|AAO39571.1|  258|Drosophila melanogaster LD45309p
           protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 156 ATKRSASKLTHRHSQLSFSPDLLSGSRFRFGGRFCEALLLLGSVLATPHGLSPESSPTRY 335
           A++    K+   +  L  +P+ L  +   F   FC    L  S L+  H   P +S T  
Sbjct: 171 ASRSLREKIEAFNKVLEAAPEKLGDTCRHFKECFCSCCTLDESFLSKGHNPLPVASKTNS 230

Query: 336 GY-ADIASQ 359
           GY  DI S+
Sbjct: 231 GYEGDIDSE 239


>AY069322-1|AAL39467.1|  263|Drosophila melanogaster LD03819p
           protein.
          Length = 263

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 156 ATKRSASKLTHRHSQLSFSPDLLSGSRFRFGGRFCEALLLLGSVLATPHGLSPESSPTRY 335
           A++    K+   +  L  +P+ L  +   F   FC    L  S L+  H   P +S T  
Sbjct: 176 ASRSLREKIEAFNKVLEAAPEKLGDTCRHFKECFCSCCTLDESFLSKGHNPLPVASKTNS 235

Query: 336 GY-ADIASQ 359
           GY  DI S+
Sbjct: 236 GYEGDIDSE 244


>AE014297-4818|AAN14293.1|  212|Drosophila melanogaster CG1971-PB,
           isoform B protein.
          Length = 212

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 156 ATKRSASKLTHRHSQLSFSPDLLSGSRFRFGGRFCEALLLLGSVLATPHGLSPESSPTRY 335
           A++    K+   +  L  +P+ L  +   F   FC    L  S L+  H   P +S T  
Sbjct: 125 ASRSLREKIEAFNKVLEAAPEKLGDTCRHFKECFCSCCTLDESFLSKGHNPLPVASKTNS 184

Query: 336 GY-ADIASQ 359
           GY  DI S+
Sbjct: 185 GYEGDIDSE 193


>AE014297-4817|AAF57204.1|  263|Drosophila melanogaster CG1971-PA,
           isoform A protein.
          Length = 263

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 156 ATKRSASKLTHRHSQLSFSPDLLSGSRFRFGGRFCEALLLLGSVLATPHGLSPESSPTRY 335
           A++    K+   +  L  +P+ L  +   F   FC    L  S L+  H   P +S T  
Sbjct: 176 ASRSLREKIEAFNKVLEAAPEKLGDTCRHFKECFCSCCTLDESFLSKGHNPLPVASKTNS 235

Query: 336 GY-ADIASQ 359
           GY  DI S+
Sbjct: 236 GYEGDIDSE 244


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,426,919
Number of Sequences: 53049
Number of extensions: 247849
Number of successful extensions: 467
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)