Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1945
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.2  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   3.9  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   3.9  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   3.9  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   3.9  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   3.9  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   3.9  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   3.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   3.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 399 INLPNNYLTCIINLIKFRPQCDLIIY 322
           +N   N +T  +NL K  P  DL++Y
Sbjct: 511 MNFSKNPVT--VNLTKLHPPADLVVY 534


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 89  YNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 89  YNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 89  YNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 89  YNYNNYNNNYKPLYYNINYIEQIPV 113


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 YSYVNY*ITLRPKFD*INYARQIVI 387
           Y+Y NY    +P +  INY  QI +
Sbjct: 311 YNYNNYNNNYKPLYYNINYIEQIPV 335


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 286 IPENNLNKQLDRHKNFTL 233
           IP   +NKQ  R  NF+L
Sbjct: 303 IPSTRINKQHTRGNNFSL 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,079
Number of Sequences: 438
Number of extensions: 3703
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)