Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1943
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558...    28   4.0  
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295...    27   6.9  

>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
            15155932-15156024,15156282-15156351,15156716-15156912,
            15156946-15157215,15158620-15158757,15158841-15158930,
            15159041-15159247,15159987-15160154,15160300-15160503,
            15160584-15160670,15160748-15160861,15161689-15161835,
            15161914-15162063,15162211-15162276,15162376-15162480,
            15162625-15162798,15162930-15163154,15163534-15163590,
            15163858-15164019,15164234-15164302,15164391-15164471,
            15164823-15164925,15165011-15165156,15165285-15165359,
            15165441-15165508,15165586-15165667,15165745-15165858,
            15166358-15166476,15166692-15166781,15166862-15166988
          Length = 1382

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 411  TGVSKTELHKEVLNYLEEMGLDKKLHVIRWM 503
            TGV++ ELH+++L+  EE   DK L  I++M
Sbjct: 1230 TGVNENELHQQLLSITEER--DKLLSEIKYM 1258


>08_02_0986 +
           23328056-23328145,23328289-23329227,23329313-23329570,
           23330384-23330692
          Length = 531

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 303 VPPTSHVAKCVGFSPSRL*DINEIHFLTHFEFSTLL 196
           +PP SH     G+ P RL D++   + T  E  +L+
Sbjct: 64  LPPPSHSVSPQGYMPGRLYDLDASKYGTEAELKSLI 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,996,916
Number of Sequences: 37544
Number of extensions: 179801
Number of successful extensions: 317
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)