Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1943
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF382674-1|ABR10027.1|  527|Homo sapiens poly(ADP-ribose) glycoh...    29   9.9  
DQ867088-1|ABH85399.1|  976|Homo sapiens poly (ADP-ribose) glyco...    29   9.9  
BC052966-1|AAH52966.1|  976|Homo sapiens PARG protein protein.         29   9.9  
BC050560-1|AAH50560.1|  976|Homo sapiens poly (ADP-ribose) glyco...    29   9.9  
AY575849-1|AAT66422.1|  868|Homo sapiens poly (ADP-ribose) glyco...    29   9.9  
AY575848-1|AAT66421.1|  894|Homo sapiens poly (ADP-ribose) glyco...    29   9.9  
AY258587-1|AAP83314.1|  976|Homo sapiens poly(ADP-ribose) glycoh...    29   9.9  
AL731572-3|CAI15135.1|  491|Homo sapiens poly (ADP-ribose) glyco...    29   9.9  
AF005043-1|AAB61614.1|  976|Homo sapiens poly(ADP-ribose) glycoh...    29   9.9  

>EF382674-1|ABR10027.1|  527|Homo sapiens poly(ADP-ribose)
           glycohydrolase 60 kDa isoform precursor protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 86  RWELIQTALLNKFTRPQNLKDAI 108


>DQ867088-1|ABH85399.1|  976|Homo sapiens poly (ADP-ribose)
           glycohydrolase protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 535 RWELIQTALLNKFTRPQNLKDAI 557


>BC052966-1|AAH52966.1|  976|Homo sapiens PARG protein protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 535 RWELIQTALLNKFTRPQNLKDAI 557


>BC050560-1|AAH50560.1|  976|Homo sapiens poly (ADP-ribose)
           glycohydrolase protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 535 RWELIQTALLNKFTRPQNLKDAI 557


>AY575849-1|AAT66422.1|  868|Homo sapiens poly (ADP-ribose)
           glycohydrolase protein.
          Length = 868

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 427 RWELIQTALLNKFTRPQNLKDAI 449


>AY575848-1|AAT66421.1|  894|Homo sapiens poly (ADP-ribose)
           glycohydrolase protein.
          Length = 894

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 453 RWELIQTALLNKFTRPQNLKDAI 475


>AY258587-1|AAP83314.1|  976|Homo sapiens poly(ADP-ribose)
           glycohydrolase protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 535 RWELIQTALLNKFTRPQNLKDAI 557


>AL731572-3|CAI15135.1|  491|Homo sapiens poly (ADP-ribose)
           glycohydrolase protein.
          Length = 491

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 50  RWELIQTALLNKFTRPQNLKDAI 72


>AF005043-1|AAB61614.1|  976|Homo sapiens poly(ADP-ribose)
           glycohydrolase protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 295 RWDLVKTMALDKIYSPEDLKDFV 363
           RW+L++T  L+K   P++LKD +
Sbjct: 535 RWELIQTALLNKFTRPQNLKDAI 557


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,130,509
Number of Sequences: 237096
Number of extensions: 1076259
Number of successful extensions: 1620
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)