Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1940
         (380 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2SEM5 Cluster: Transcriptional regulator; n=1; Hahella...    33   1.8  
UniRef50_Q5KGU7 Cluster: Arginine N-methyltransferase 3, putativ...    33   2.4  
UniRef50_Q4DV44 Cluster: Putative uncharacterized protein; n=1; ...    32   3.2  
UniRef50_Q2SCI2 Cluster: Lysophospholipase L1; n=1; Hahella chej...    31   5.5  

>UniRef50_Q2SEM5 Cluster: Transcriptional regulator; n=1; Hahella
           chejuensis KCTC 2396|Rep: Transcriptional regulator -
           Hahella chejuensis (strain KCTC 2396)
          Length = 300

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -3

Query: 201 DGLPPHFLILFRPRDRIPVG*QNETA*RRQIEQRPHLVSFDCHLLSSWALSGRGSA 34
           + L  H  I FR  D++     N     RQ++ RP L++    LL  WA  G+G A
Sbjct: 182 EDLSEHRAIFFRTSDQVLHWQANINGRWRQVDIRPALITSSPRLLRQWAGEGKGLA 237


>UniRef50_Q5KGU7 Cluster: Arginine N-methyltransferase 3, putative;
           n=2; Filobasidiella neoformans|Rep: Arginine
           N-methyltransferase 3, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 596

 Score = 32.7 bits (71), Expect = 2.4
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  PPANKDASGTSSAKSPRTQQVTIKRYEM-RSLFYLAALCCLVLSAYGNPISRPEEDKEVG 189
           PP    A  ++ A+SP +Q+VT+   E+ ++   LAA+  LV    G+     E+D+ +G
Sbjct: 139 PPQASSAGPSNDAQSPESQKVTLLEAELEKARKDLAAMQLLVTKTIGS-----EDDESMG 193

Query: 190 RQ 195
           RQ
Sbjct: 194 RQ 195


>UniRef50_Q4DV44 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 285

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +1

Query: 16  PANKDASGTSSAKSPRTQQVTIKRYEMRSLFYLAALCCLVLSAYGNPISRPEEDKEV 186
           P     SG  S+ SP+T+Q  ++ Y +  LF     CC  L +  +P       KE+
Sbjct: 56  PRGATTSGFQSSASPKTRQRILQEYALSPLFGARVPCC-TLGSMRSPREMVSSKKEI 111


>UniRef50_Q2SCI2 Cluster: Lysophospholipase L1; n=1; Hahella
           chejuensis KCTC 2396|Rep: Lysophospholipase L1 - Hahella
           chejuensis (strain KCTC 2396)
          Length = 279

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 34  SGTSSAKSPRTQQVTI-KRYEMRSLFYLAALCCLVLSAYGNPISRPEEDK 180
           S TS+   P T  + + KR+ ++S++ L ALCCL++S    PI++   DK
Sbjct: 49  SSTSTEVMPATSFLNLFKRHVIKSVWTLFALCCLMVS----PITQAVTDK 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,341,417
Number of Sequences: 1657284
Number of extensions: 3850323
Number of successful extensions: 10600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10598
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)