Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1938
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p pro...   179   4e-45
AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA ...   179   4e-45
AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB...    32   0.63 
AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-P...    30   3.4  
AF000178-1|AAB58341.1|  598|Drosophila melanogaster M-spondin pr...    29   7.8  

>AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 4e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +1

Query: 178 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 357
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 358 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 474
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 4e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +1

Query: 178 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 357
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 358 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 474
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB,
           isoform B protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 343 LELVEDCGPLP-LTNPKCQLDTEKTNKTAPFPGCCPIFTCE 462
           L+L ED   +P LT   C      TN  A +P CCP++ C+
Sbjct: 68  LQLWEDSCQVPKLTQGNCT-PVPSTNPHAEYPRCCPLYECK 107


>AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-PA
           protein.
          Length = 115

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +1

Query: 217 DFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVEDCGPLPLT-NPKC 393
           D+PG C+       +    +++  P      C     +P  +LE +  CG   L    KC
Sbjct: 32  DYPGQCYYEELNQAIPKKQSYK--PINREGYCQSIYCRPDYVLE-ISYCGRHNLVPTEKC 88

Query: 394 QLDTEKTNKTAPFPGCCPIFTCEE 465
           ++ ++       FP CCP   C+E
Sbjct: 89  RIASDMRRT---FPECCPKLVCQE 109


>AF000178-1|AAB58341.1|  598|Drosophila melanogaster M-spondin
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 355 EDCGPLPLTNPKCQLDTEKTNKTAPFPGC 441
           +D  P+P  NP   L T    +TAP  GC
Sbjct: 86  DDPSPVPNMNPTASLATPPATQTAPQTGC 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,169,890
Number of Sequences: 53049
Number of extensions: 438781
Number of successful extensions: 1132
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)