Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1936
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   6.0  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   7.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 271 TKGLLLISKSRKFRIQSRFYCNHRT 197
           +  LL+ S + +FRI   + CNH T
Sbjct: 833 SNALLIFSPTNRFRIFCHWLCNHST 857


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 771  HYCFTAEIGGVLVPTRADSQEVLP 700
            H  F AEIG  LV    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 SKSIQLCGYEKVANRQSSLRINNIICHV 477
           SK ++ C Y+  A R SSLRI   + ++
Sbjct: 328 SKVMKECWYQHPAARLSSLRIKKTLANL 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,450
Number of Sequences: 2352
Number of extensions: 13841
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)