Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1935
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 292 5e-78
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 287 2e-76
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 224 1e-57
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 224 2e-57
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 208 1e-52
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 203 3e-51
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 194 1e-48
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 190 3e-47
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 190 3e-47
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 180 2e-44
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 180 2e-44
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 178 1e-43
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 6e-42
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 172 8e-42
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 167 2e-40
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 156 4e-37
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 146 6e-34
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 126 4e-28
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 125 9e-28
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 113 5e-24
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 104 2e-21
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 102 9e-21
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 98 2e-19
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 92 1e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 4e-16
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 82 1e-14
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 82 1e-14
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 80 6e-14
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 79 1e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 76 7e-13
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 76 9e-13
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 66 1e-09
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 52 1e-05
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 51 3e-05
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 49 1e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.014
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.23
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 36 0.70
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.92
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.2
UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 34 2.8
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 3.7
UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3; ... 34 3.7
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 3.7
UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome sh... 33 4.9
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.9
UniRef50_Q4N8D1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 6.5
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 8.6
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 292 bits (717), Expect = 5e-78
Identities = 138/208 (66%), Positives = 159/208 (76%)
Frame = +3
Query: 54 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 233
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 234 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 413
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 414 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 593
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 594 ILKVYKSQRLRAGKGKMRNRRRIQRKGP 677
I KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGP 207
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 287 bits (703), Expect = 2e-76
Identities = 137/211 (64%), Positives = 160/211 (75%)
Frame = +3
Query: 48 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 227
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 228 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 407
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 408 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 587
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 588 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 680
+DI KVYKSQR RAG+G MR+RRRI R+GPL
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRRRIARRGPL 211
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 224 bits (548), Expect = 1e-57
Identities = 110/206 (53%), Positives = 136/206 (66%)
Frame = +3
Query: 63 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 242
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 243 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 422
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 423 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 602
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNR 181
Query: 603 VYKSQRLRAGKGKMRNRRRIQRKGPL 680
V S+ +RAG+GKMRNRR + R+GP+
Sbjct: 182 VNDSREIRAGRGKMRNRRYVARRGPM 207
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 224 bits (547), Expect = 2e-57
Identities = 114/209 (54%), Positives = 135/209 (64%), Gaps = 3/209 (1%)
Frame = +3
Query: 63 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 242
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 243 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 422
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 423 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSD 593
ARGH I ++ E+PLV+ +V E I +T A L+ + A D
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKD 181
Query: 594 ILKVYKSQRLRAGKGKMRNRRRIQRKGPL 680
+ KV S++LRAGKGK+R RR QR+GPL
Sbjct: 182 VEKVKDSRKLRAGKGKLRGRRHRQRRGPL 210
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 208 bits (507), Expect = 1e-52
Identities = 107/211 (50%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Frame = +3
Query: 54 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 233
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 234 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 413
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 414 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWS 590
ARGH I +PELPLV+++++Q INKT AV F + K
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLE 180
Query: 591 DILK-VYKSQRLRAGKGKMRNRRRIQRKGPL 680
+ +K + S +R GKGKMRNRRR+ GPL
Sbjct: 181 EEMKRIESSIAIRCGKGKMRNRRRVCAVGPL 211
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 203 bits (496), Expect = 3e-51
Identities = 102/205 (49%), Positives = 127/205 (61%), Gaps = 1/205 (0%)
Frame = +3
Query: 69 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 245
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 246 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 425
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 426 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 605
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKV 184
Query: 606 YKSQRLRAGKGKMRNRRRIQRKGPL 680
++ +RAG K R ++ RKGPL
Sbjct: 185 VSTKVVRAGISKQRGKKYRVRKGPL 209
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 194 bits (474), Expect = 1e-48
Identities = 99/209 (47%), Positives = 126/209 (60%)
Frame = +3
Query: 54 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 233
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 234 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 413
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 414 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 593
ARGH I + E+PLV ++ ++ + KTK A+ FL L +
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDE 179
Query: 594 ILKVYKSQRLRAGKGKMRNRRRIQRKGPL 680
+ ++ KS +LRA GKMRNR+ GPL
Sbjct: 180 VNRLIKSXKLRARXGKMRNRKYKISNGPL 208
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 190 bits (463), Expect = 3e-47
Identities = 99/207 (47%), Positives = 130/207 (62%), Gaps = 1/207 (0%)
Frame = +3
Query: 63 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 242
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 243 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 422
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 423 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDIL 599
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+L
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVL 182
Query: 600 KVYKSQRLRAGKGKMRNRRRIQRKGPL 680
KV S+ +RAG+GKMR R+ +RKGPL
Sbjct: 183 KVIASKTVRAGQGKMRGRKIKERKGPL 209
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 190 bits (463), Expect = 3e-47
Identities = 96/203 (47%), Positives = 124/203 (61%)
Frame = +3
Query: 72 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 251
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 252 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 431
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 432 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 611
ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+ +
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAE 185
Query: 612 SQRLRAGKGKMRNRRRIQRKGPL 680
S+R+R G GK RNRR QR+G L
Sbjct: 186 SKRIRVGSGKARNRRYTQRRGVL 208
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 180 bits (439), Expect = 2e-44
Identities = 88/196 (44%), Positives = 120/196 (61%)
Frame = +3
Query: 60 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 239
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 240 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 419
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 420 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 599
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELK 180
Query: 600 KVYKSQRLRAGKGKMR 647
+V ++R + KGK R
Sbjct: 181 RVSVTKRTKR-KGKKR 195
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 180 bits (439), Expect = 2e-44
Identities = 95/202 (47%), Positives = 116/202 (57%)
Frame = +3
Query: 75 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 254
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 434
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 435 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 614
+ARGH I + LP++V+D + + KTK AV LR L ++ +V KS
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKS 183
Query: 615 QRLRAGKGKMRNRRRIQRKGPL 680
+ +R GKGKMRNRR QRKG L
Sbjct: 184 RGVRCGKGKMRNRRYTQRKGIL 205
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 178 bits (433), Expect = 1e-43
Identities = 90/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Frame = +3
Query: 66 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 245
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 246 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 425
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 426 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 605
+RGH IE + E+P+VV D +++INKTK AV L + +++ ++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRI 182
Query: 606 YK-SQRLRAGKGK 641
K + R R G+ K
Sbjct: 183 DKVTGRARDGRKK 195
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 6e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +3
Query: 81 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 260
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 261 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 392
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 172 bits (418), Expect = 8e-42
Identities = 84/166 (50%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
Frame = +3
Query: 192 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 371
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 372 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 542
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 543 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 680
KT AV L+ + A +D K S++LRAGKGK+R RR QR+GPL
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPL 187
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 167 bits (407), Expect = 2e-40
Identities = 84/185 (45%), Positives = 111/185 (60%)
Frame = +3
Query: 126 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 305
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 306 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 485
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 486 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 665
++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR +
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRRFKK 197
Query: 666 RKGPL 680
GPL
Sbjct: 198 PTGPL 202
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 156 bits (379), Expect = 4e-37
Identities = 78/207 (37%), Positives = 119/207 (57%)
Frame = +3
Query: 60 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 239
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 240 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 419
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 420 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 599
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQ 178
Query: 600 KVYKSQRLRAGKGKMRNRRRIQRKGPL 680
+V R+ KGK R +KGPL
Sbjct: 179 RVLDGSVHRSSKGKFRRAAYKTKKGPL 205
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 146 bits (353), Expect = 6e-34
Identities = 83/204 (40%), Positives = 105/204 (51%)
Frame = +3
Query: 69 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 248
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 249 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 428
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 429 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 608
+ARGH I +P +PLVV + KTK A+ ++ + D+ +
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCK 172
Query: 609 KSQRLRAGKGKMRNRRRIQRKGPL 680
S+ +RAG+GKMRNRR I RKGPL
Sbjct: 173 DSRHIRAGRGKMRNRRYITRKGPL 196
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 126 bits (305), Expect = 4e-28
Identities = 55/69 (79%), Positives = 66/69 (95%)
Frame = +3
Query: 474 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 653
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 654 RRIQRKGPL 680
RR+ RKGPL
Sbjct: 65 RRLHRKGPL 73
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 125 bits (302), Expect = 9e-28
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
Frame = +3
Query: 69 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 248
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 249 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 425
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 426 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 605
+ RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ +
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERA 177
Query: 606 YKSQRLRAGKGKMRNRRRIQRKGPL 680
++R+RAGKGK R RR ++ K L
Sbjct: 178 KSNRRIRAGKGKRRGRRYVKPKSVL 202
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 113 bits (271), Expect = 5e-24
Identities = 65/184 (35%), Positives = 89/184 (48%)
Frame = +3
Query: 129 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 308
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 309 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 488
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 489 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 668
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR +
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEP 221
Query: 669 KGPL 680
K L
Sbjct: 222 KSVL 225
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 104 bits (249), Expect = 2e-21
Identities = 69/199 (34%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Frame = +3
Query: 111 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 290
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 291 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 443
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 444 XXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRL 623
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNV 192
Query: 624 RAGKGKMRNRRRIQRKGPL 680
R+GKGKMRNRR +QR+GPL
Sbjct: 193 RSGKGKMRNRRYVQRRGPL 211
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 102 bits (244), Expect = 9e-21
Identities = 58/202 (28%), Positives = 99/202 (49%)
Frame = +3
Query: 75 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 254
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 434
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 435 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 614
+ RGH + ++ ++P V+ D+++ + TK+ + L DI++ K
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKG 176
Query: 615 QRLRAGKGKMRNRRRIQRKGPL 680
+++++GKGK+R R+ KGPL
Sbjct: 177 RKIKSGKGKLRGRKYRTPKGPL 198
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 97.9 bits (233), Expect = 2e-19
Identities = 57/185 (30%), Positives = 89/185 (48%)
Frame = +3
Query: 126 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 305
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN-- 82
Query: 306 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 485
SG+ A GGR+ P ++ +ARGH+
Sbjct: 83 ---SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 486 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 665
+ P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ +
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKE 199
Query: 666 RKGPL 680
GPL
Sbjct: 200 PIGPL 204
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 92.3 bits (219), Expect = 1e-17
Identities = 54/185 (29%), Positives = 87/185 (47%)
Frame = +3
Query: 126 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 305
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLGR 77
Query: 306 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 485
+ GGR P KP R+W + R H+
Sbjct: 78 -----RAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 486 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 665
E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR ++
Sbjct: 133 FEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVK 190
Query: 666 RKGPL 680
+K L
Sbjct: 191 KKSVL 195
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 471 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 650
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +3
Query: 228 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 407
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 408 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 587
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 588 SDILKVYKSQRLR 626
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 82.2 bits (194), Expect = 1e-14
Identities = 59/202 (29%), Positives = 92/202 (45%)
Frame = +3
Query: 75 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 254
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 255 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 434
G ++R+PR+ GG A G G+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 435 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 614
+ RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + +
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREG 177
Query: 615 QRLRAGKGKMRNRRRIQRKGPL 680
+ +RAG+GKMR RR Q K L
Sbjct: 178 KHIRAGRGKMRGRRYKQPKSVL 199
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 81.8 bits (193), Expect = 1e-14
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Frame = +3
Query: 72 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 251
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 252 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 431
S G GR VAR+PR++G S + A NM RGGR P + +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATI 127
Query: 432 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVY 608
+ RGH LP+V+ V +I+ ++A L + + D+L+
Sbjct: 128 SAISATSREDLVRQRGHRF-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAK 186
Query: 609 KSQRLRAGKGKMRNRR 656
+ +R AGKGKMR RR
Sbjct: 187 EGKRYNAGKGKMRGRR 202
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 79.8 bits (188), Expect = 6e-14
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +3
Query: 108 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 281
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 282 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 461
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 462 XXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 641
RGHII+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSA 189
Query: 642 MRNR 653
+R R
Sbjct: 190 LRGR 193
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +3
Query: 471 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 650
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 651 RRRIQRKGPL 680
RR I RKGPL
Sbjct: 62 RRYISRKGPL 71
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +3
Query: 525 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 674
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 159 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 305
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 75.8 bits (178), Expect = 9e-13
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Frame = +3
Query: 126 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 281
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 282 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 452
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 453 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAG 632
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAG
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAG 192
Query: 633 KGKMRNRRRIQRKGPL 680
KGK R R I+RKGPL
Sbjct: 193 KGKRRGRAYIERKGPL 208
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 65.7 bits (153), Expect = 1e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Frame = +3
Query: 126 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 305
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 306 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 485
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 486 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 656
++ E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G R R+
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGRK 185
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 516 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 680
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPL 55
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 50.8 bits (116), Expect = 3e-05
Identities = 54/208 (25%), Positives = 77/208 (37%), Gaps = 22/208 (10%)
Frame = +3
Query: 99 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 257
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 258 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 437
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 438 XXXXXXXXXXQARGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLR 572
RGH E P+++ D+ ++ T++ V +
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMME 215
Query: 573 RLKAWSDILKVYKSQRLRAGKGKMRNRR 656
L +D+ + + +RAGKG MR R+
Sbjct: 216 GLGLGADLDRARTGRTIRAGKGTMRGRK 243
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 48.8 bits (111), Expect = 1e-04
Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +2
Query: 302 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGSSRCCYRRPSARSG*RT 481
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 482 HY*KDSRA--SLGCS*QSPGDQQDQTGCHLPEAPQGMV*YP*GVQVSASSCW*G*NAQPS 655
RA + G PG ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP- 250
Query: 656 SYPA*GAP 679
P GAP
Sbjct: 251 --PLRGAP 256
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 471 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 602
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 370 VGANIRPPRHMLPKAP*P 317
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.3 bits (80), Expect = 0.70
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 473 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 372
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.92
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 102 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 275
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 276 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 359
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 276 ARIPRVRGGGTHRSGQGAFGNMCRGG 353
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -1
Query: 219 SRSKAASSSWT*KREHH*PGPDVWAP*TRTGGAWLHP--APSRSSLNTPTLKVGLPIDSF 46
S+ K ++S T + P VW P T G W P AP R S TP G P+ S
Sbjct: 77 SKEKRGATSRTCYQTLRGPQRAVWEPGKATAGCWGPPRAAPGRESTGTPCRDPGDPLRSH 136
Query: 45 RYFSEAIPPKY 13
R PP +
Sbjct: 137 RAPLHEWPPPH 147
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 602 LKDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQG 423
++ + PC+ A D F L L+F S N + F+ ++ +E G++NG QG
Sbjct: 282 IQSVDPCISAQVAQDHTFAL---LEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQG 338
Query: 422 RSPLSEVDATVP 387
D VP
Sbjct: 339 LEVRRPKDYIVP 350
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 246 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 356
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 411
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 74 SVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQ 223
SVG E RDGAG + PP + A + Q VQELEA L +E+
Sbjct: 211 SVGEDEETRDGAGHDEPPPAPAEPASEAALAQ-AQLAQVQELEAKLQQER 259
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 566 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 411
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 410 SEVDATVPAPPGL 372
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 2
SCAF15032, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 347 WWTYVRPHEA---LAALAPSRQPPTAE-SGLGSSRCCYRRPSARS 469
WWT RPH +A AP R P T SGLGS YRRP R+
Sbjct: 306 WWT--RPHRRGTRPSARAPPRVPATPPPSGLGSGCYGYRRPLGRT 348
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 349 PRHMLPKAP*PDLWVPPPR 293
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_Q4N8D1 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 549
Score = 33.5 bits (73), Expect = 4.9
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -2
Query: 653 TVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNN--V 480
T +H+T+T KT+ +D C + DD+++ +D +F S + G + N+ V
Sbjct: 460 TSSHYTVTLVKTIVEFKFEDGVNCKKIKYGDDNIWNHMDDTEFPSIKMFQFGLVSNDLYV 519
Query: 479 SSSLNERWDAGSSNGCCQGRSPLSEVDATVPA 384
+S N+ W + G Q P +E D P+
Sbjct: 520 QNSSND-WKKLNYKG--QNTPPETESDTVTPS 548
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 57 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 230
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 231 GHQTSAESWGTGRAVARIPR 290
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 111 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 278
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 279 RIPRVRGGGTHRSGQG 326
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 192 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 359
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,574,453
Number of Sequences: 1657284
Number of extensions: 14516657
Number of successful extensions: 48213
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 45623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48142
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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