Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1934
(391 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 119 2e-27
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 117 5e-27
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 117 5e-27
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 117 5e-27
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 117 5e-27
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 28 5.0
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 5.0
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 5.0
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 5.0
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 5.0
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 5.0
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 5.0
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 119 bits (286), Expect = 2e-27
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1
Query: 4 ISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 183
ISDD +LTLM D+GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K N
Sbjct: 95 ISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTN 154
Query: 184 TALDK 198
TALDK
Sbjct: 155 TALDK 159
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 117 bits (282), Expect = 5e-27
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1
Query: 4 ISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 183
ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K N
Sbjct: 95 ISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTN 154
Query: 184 TALDK 198
TALDK
Sbjct: 155 TALDK 159
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 117 bits (282), Expect = 5e-27
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1
Query: 4 ISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 183
ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K N
Sbjct: 95 ISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTN 154
Query: 184 TALDK 198
TALDK
Sbjct: 155 TALDK 159
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 117 bits (282), Expect = 5e-27
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1
Query: 4 ISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 183
ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K N
Sbjct: 95 ISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTN 154
Query: 184 TALDK 198
TALDK
Sbjct: 155 TALDK 159
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 117 bits (282), Expect = 5e-27
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1
Query: 4 ISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 183
ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K N
Sbjct: 95 ISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTN 154
Query: 184 TALDK 198
TALDK
Sbjct: 155 TALDK 159
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 564 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 599
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 1042 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1077
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 155 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 48
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,556,650
Number of Sequences: 53049
Number of extensions: 303397
Number of successful extensions: 826
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -