Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1932
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0229 + 1834102-1834358,1834442-1834901 34 0.12
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 32 0.38
03_06_0218 - 32442904-32443347,32444426-32444626,32446584-32447156 31 0.66
10_08_0233 - 16061182-16061714,16062765-16063578 31 0.87
10_08_0223 - 15986763-15987575 31 0.87
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 31 0.87
10_08_0242 - 16120554-16121129 30 1.5
12_01_0419 - 3316866-3318172,3318249-3318360 29 2.7
10_08_0236 + 16078162-16078731 29 2.7
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187... 29 2.7
02_05_0059 - 25482207-25482271,25482432-25482651 29 2.7
01_05_0266 + 20209005-20209137,20209606-20210183 29 2.7
07_03_0559 + 19475893-19476783 29 3.5
06_01_0732 + 5397217-5397327,5399010-5399831 29 3.5
03_06_0471 + 34169562-34169892,34170121-34170347 29 3.5
11_04_0008 + 12115147-12115354,12115397-12116130 29 4.7
08_01_1010 - 10215625-10216335,10216372-10216473 28 6.2
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 28 6.2
04_01_0518 - 6795833-6796450,6799940-6800164 28 6.2
01_01_0570 - 4231100-4232560 28 6.2
10_08_0221 - 15980370-15980927 28 8.1
07_03_0560 + 19479597-19480667 28 8.1
07_03_0189 + 14862848-14862904,14862936-14863071,14864436-148645... 28 8.1
02_05_0149 + 26290236-26290880 28 8.1
01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146 28 8.1
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 681 GEQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGD 502
G R L G +A+R D L G G +S + + + VGD G+G G VG+
Sbjct: 79 GSHRGCLRGRAVAERRDDDGLKWGGGEDAVSATRWGRTAMGDAVEEVGDGGTGVDGVVGE 138
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -3
Query: 690 TGVGEQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGS 511
TG+G+Q+ + G G+ Q+ + + G G + M H + + G + G G++
Sbjct: 772 TGMGQQQPQMVGTGMGQQ-QPQMVGAGMGQQYMQGHGRTVQQMMQG--KMAPQGPGSMPG 828
Query: 510 VGD-HGGGYVT 481
G GGGY++
Sbjct: 829 AGSMPGGGYLS 839
>03_06_0218 - 32442904-32443347,32444426-32444626,32446584-32447156
Length = 405
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -3
Query: 597 GMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 487
G S HW A C S + G G GA G G GGGY
Sbjct: 116 GDSCHW-ARECPQSVPATGGGGGGGAFGGSGGGGGGY 151
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -3
Query: 618 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 487
AGG G E+ +S G TS NG G G G GG Y
Sbjct: 344 AGGGSASGAGENIDTVSTGYGGSTSAAGNGGG--GGGGQAGGSY 385
>10_08_0223 - 15986763-15987575
Length = 270
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 618 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 481
AGG G G + S G+ + +G+G GS G GGGY +
Sbjct: 191 AGGGGGGGGGHGGGPAASPSYGVGAGAGSGAGDAGSDGSSGGGYAS 236
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3
Query: 678 EQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGIT 547
E+ R + G +A+ LR AGG GVR + H + + C SG T
Sbjct: 194 EEERAVAGGAVAE-LRPGGRAGGGGVRVRARHRAGVPCPLSGQT 236
>10_08_0242 - 16120554-16121129
Length = 191
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -3
Query: 657 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITS------VGDNGSGAIGSVGDHG 496
G+ A R+ +S A GSG G E +++ +G+ S G NG+ A G G G
Sbjct: 18 GLASAVRVERYSNAQGSGT-GSGEGTGSVNGAGAGLGSGTGSGRSGYNGAHASGGGGGGG 76
Query: 495 GGY 487
GGY
Sbjct: 77 GGY 79
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 113 DSLPTASEPTASQPTASEPTASQP 184
+ PTA+EP P A EP A++P
Sbjct: 330 EETPTATEPEPEPPAAEEPPAAEP 353
>10_08_0236 + 16078162-16078731
Length = 189
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = -3
Query: 627 HSLAGGSGVRGMSEHWSAISCVSSG-----ITSVGDNGSGAIGSVGDHGGG 490
H+ AGGSG G S + S SG +S NG G G D GGG
Sbjct: 67 HATAGGSGGGGGSSQYGG-SAYGSGNGSGSSSSQTSNGEGGYGGESDAGGG 116
>07_03_0923 -
22617627-22617860,22618486-22618542,22618612-22618768,
22618875-22619014,22619642-22619777,22619874-22620142,
22620272-22620492,22620648-22620707,22620859-22620915,
22621008-22621405,22621929-22622000,22622098-22622169,
22622246-22622317,22622574-22622645,22622738-22622867,
22623065-22623170
Length = 750
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 591 SEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVT 481
+E W + CV S ITS+ N + G +G+ G + +
Sbjct: 63 NEGWQGVECVVSNITSITLNAANLGGQLGNTLGNFTS 99
>02_05_0059 - 25482207-25482271,25482432-25482651
Length = 94
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 672 RRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGG 493
RR GG Q++ D GG ++G + S G ++ G G G++G G++GG
Sbjct: 19 RRRRGG---GQQVND---GGGGSMKGGGDSGSLARGGDGGGSTWGGGGGGSVGRGGNNGG 72
Query: 492 G 490
G
Sbjct: 73 G 73
>01_05_0266 + 20209005-20209137,20209606-20210183
Length = 236
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 687 GVGEQRRDLGGMGLAQRLRDHSLAGGSG 604
G G+++ + G +GLA LR +LAGG G
Sbjct: 47 GAGDRQWEPGAVGLALSLRASALAGGGG 74
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -3
Query: 621 LAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGYVTDQLLG 466
+ GG G G + + G +G G G G G GGG+ ++G
Sbjct: 177 IGGGGGKGGGFGAGGGVGGAAGGGGGMGSGGGGGFGGGGGKGGGFGAGGVMG 228
>06_01_0732 + 5397217-5397327,5399010-5399831
Length = 310
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -3
Query: 618 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGG 490
A G+GV +S W A S SS +G G GA G+V GGG
Sbjct: 210 AYGAGV-DVSALWRASSSSSSSPPMMGSGGGGAFGTVA--GGG 249
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 618 AGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 487
AG SG + +A++ + G V G G G G HGG +
Sbjct: 121 AGASGYGALLAGGAAVAAAAVGAHMVRPGGGGGHGMFGHHGGKF 164
>11_04_0008 + 12115147-12115354,12115397-12116130
Length = 313
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 687 GVGEQRRDLGGMGLAQRLRDHSLAGGSGV 601
G +R+ G +GLA LR +LAGG GV
Sbjct: 183 GCRVSQREPGAVGLALSLRASALAGGGGV 211
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 554 PELTQLMALQCSDMPRTPLPPARLWSLSL*ASPIPPRSRLCSPTPVT 694
P Q A P TP PP R SL S PPR+ TP++
Sbjct: 151 PSTPQRHAASPDYTPSTPTPPRRAASLDYTPSTPPPRAASPDYTPLS 197
>06_01_0520 +
3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = -3
Query: 684 VGEQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHW----SAISCVSSGITSVGDNGSGAI 517
VG+Q+++ G G A + +H AGG V H S T G GSG
Sbjct: 39 VGQQQQEEEGNGDAGKSEEHGSAGGRMVWKKKHHHHHQPRTPVAAESRATWRGGKGSGKG 98
Query: 516 GSVGDHGGGY 487
G GGG+
Sbjct: 99 RGGGGGGGGF 108
>04_01_0518 - 6795833-6796450,6799940-6800164
Length = 280
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = -3
Query: 687 GVGEQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSV 508
G G D GG G S G +GVR MS S CVSS + DNG G++
Sbjct: 15 GTGGHAWDEGGHGA-------SAGGYTGVRRMSIGSSW--CVSSMLFEYDDNGKRVKGTL 65
Query: 507 GDHGGGYVTDQLL 469
GG + ++ L
Sbjct: 66 QGEGGNGIPEEEL 78
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = -3
Query: 687 GVGEQRRDLGGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSV 508
G G R GG+G AGG G G + + G+ G G G +G
Sbjct: 137 GAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGGVGGGGRFGGGGMGGG 196
Query: 507 GDHGGG 490
G GGG
Sbjct: 197 GGFGGG 202
>10_08_0221 - 15980370-15980927
Length = 185
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = -3
Query: 657 GMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 487
G G Q D S A G G G SG S +G G G G +GGGY
Sbjct: 53 GSGYGQASGDGSYASGDGGGGGG---GGGQNGGSGYGSGSGSGYGQAGGYGPYGGGY 106
>07_03_0560 + 19479597-19480667
Length = 356
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -3
Query: 621 LAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 487
L GG G G + + G +G G G G G GGG+
Sbjct: 182 LGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGF 226
>07_03_0189 +
14862848-14862904,14862936-14863071,14864436-14864593,
14864640-14865533,14865634-14865792,14866342-14866623
Length = 561
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 690 TGVGEQRRDLGGMGLAQRLRDHSLAGGSG 604
+GVG+QR GG+ L ++L GG G
Sbjct: 35 SGVGKQRSRCGGLDLDEQLEQLCAGGGDG 63
>02_05_0149 + 26290236-26290880
Length = 214
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 531 GSGAIGSVGDHGGGY 487
GSG IG G++GGGY
Sbjct: 148 GSGGIGGYGNYGGGY 162
>01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146
Length = 855
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 566 QLMALQCSDMPRTPLPPARLWSLSL*ASP-IPPRSRLCSPTP 688
+L L D+P R W+ L A+P +PPRS SP+P
Sbjct: 26 RLYGLGAGDLPPMEARRFRWWADELAAAPPLPPRSPSPSPSP 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.125 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,046,164
Number of Sequences: 37544
Number of extensions: 152374
Number of successful extensions: 1365
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -