Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1927
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       60   6e-11
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    35   0.003
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    28   0.38 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    27   0.66 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.66 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    27   0.66 
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    26   1.2  
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    24   6.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.2  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 60.5 bits (140), Expect = 6e-11
 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
 Frame = +1

Query: 52  KSLDKIFLMTYDFKGAWSNTDLGYQTTVYAPSWNSEELY---TTHYAVDALLEQGVDSNK 222
           KS   + +M YD  GAW +   G    +Y  S ++ +       + ++   L QG    K
Sbjct: 213 KSFHFLNVMVYDMHGAWDSY-CGINAPLYRGSADTTDRLGQINVNASIHFWLAQGCTGRK 271

Query: 223 IIVGVAMYGRGWTGVTNYTNGNYFSGTGNGPVSG--TWEDGVVDYRQIQRDLNNYVYTFD 396
           +++G+ +YGR +T + +  N    + T  G   G  T E GV+ Y +    L    +   
Sbjct: 272 LVLGIPLYGRNFT-LASAANTQIGAPTVGGGTVGRYTREPGVMGYNEFCEKLATEAWDLR 330

Query: 397 SAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 543
            + +    +       + +D + SV  KVKY+    LGG   W ++ D+
Sbjct: 331 WSEEQQVPYAVRNNQWVGYDDLRSVQLKVKYLLDQGLGGAMVWSLETDD 379


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 55  SLDKIFLMTYDFKGAWSNTDLG-YQTTVYAPSWNSEELYTTHY--AVDALLEQGVDSNKI 225
           ++D + +  YD +    N   G Y   +Y P+   E +   +    V A   QG   +KI
Sbjct: 244 NIDYVNVAAYDQQTPERNPKEGDYTAPIYEPT---ERVVGNNVDDKVKAWHSQGTPLDKI 300

Query: 226 IVGVAMYGRGW 258
           +VG+A YGRGW
Sbjct: 301 VVGIATYGRGW 311


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 671  RLPFEIIDTILQYLDPISHAKVVGLTTRVKCR 766
            ++PF  +D I Q +DP +  KV  +     CR
Sbjct: 959  QVPFRCVDEINQGMDPTNERKVFNMLVEETCR 990


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 256 WTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQRDLNNYVYT 390
           WTGV +    NY  G    P  G  ED     R+I R  +N+  T
Sbjct: 595 WTGVMHGDEINYVFGEPLNPTLGYTEDEKDFSRKIMRYWSNFAKT 639


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 256 WTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQRDLNNYVYT 390
           WTGV +    NY  G    P  G  ED     R+I R  +N+  T
Sbjct: 595 WTGVMHGDEINYVFGEPLNPTLGYTEDEKDFSRKIMRYWSNFAKT 639


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 256 WTGVTNYTNGNYFSGTGNGPVSGTWEDGVVDYRQIQRDLNNYVYT 390
           WTGV +    NY  G    P  G  ED     R+I R  +N+  T
Sbjct: 481 WTGVMHGDEINYVFGEPLNPTLGYTEDEKDFSRKIMRYWSNFAKT 525


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
 Frame = +1

Query: 196 LEQGVDSNKIIVGVAMYGRGW--TGVTNYTNGNYFSGTG-NGPVSGTWEDGVVDYRQIQR 366
           L     ++K+IV +  +GRGW   G +  T        G + P   T  +G   + ++  
Sbjct: 283 LTNNAPASKLIVSIPTFGRGWKMNGDSGITGVPPLPADGPSNPGPQTQTEGFYSWAEVCA 342

Query: 367 DLNNYVYTFDSAAQA-------------SYVF-----DKSKGDLISFDSVDSVLGKVKYV 492
            L N   T    A A             SY F     +   G  +S++  D+   K  YV
Sbjct: 343 MLPNPSNTALKGADAPLRKVGDPTKRFGSYAFRLPDSNGEHGVWVSYEDPDTAGNKAGYV 402

Query: 493 DRNKLGGLFAWEIDADN 543
               LGG+   ++  D+
Sbjct: 403 KAKNLGGIAINDLSYDD 419


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -2

Query: 324 ARHRPVASAGKIVAIRI-ICY----AGPAAAVHGDAHNYFVGIDALF 199
           A H P+  A    A    + Y    A P AAVHG +   F G+ A +
Sbjct: 130 AAHAPIVKAAYPAAYAAPLAYKTPLAAPVAAVHGGSVVQFAGLGASY 176


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 664 FCSCALCNARHPNNNCTQMILAFTVH 587
           +  C LCN +HP + C +   A  ++
Sbjct: 341 YLKCPLCNEQHPLHVCERFERASVIN 366


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 659 AKRIRLPFEIIDTILQYLDPISH 727
           AKR RL   ++D+IL+Y  P+ H
Sbjct: 795 AKR-RLLASVVDSILRYAAPVWH 816


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,806
Number of Sequences: 2352
Number of extensions: 19313
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)