Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1925
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   0.91 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 106 FITFLIKNINAIKTSITRPKRSKYIFWYKGTSNAG 2
           F T  IKN    +  I  P+ +   FWY   S  G
Sbjct: 436 FFTDCIKNREGFEMVIAEPEYTNICFWYVPKSLRG 470


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 405 ITLDIVFSH*NCILYL*TSNSCIYNLNLG 491
           +TL     H  C+LY+   +   YNL+LG
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHFLTYNLSLG 192


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 405 ITLDIVFSH*NCILYL*TSNSCIYNLNLG 491
           +TL     H  C+LY+   +   YNL+LG
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHFLTYNLSLG 192


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 256 VYF-LSWLTGRFFLELSISCITCDKIKLILGLTSRTIQHLL 375
           VYF L W   +  LE+      CDK++L +G    ++  L+
Sbjct: 267 VYFTLQWAFLQI-LEILALAYLCDKVQLKIGEIKYSVNKLI 306


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 259 KLLLKYKYVRINLTYQSESNLYY 191
           +++  + Y+  NLTY + +  YY
Sbjct: 34  RMMRSWYYLLTNLTYNNTNRKYY 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,557
Number of Sequences: 336
Number of extensions: 4183
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)