Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1919
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    31   0.71 
AF067943-9|AAC17667.1|  348|Caenorhabditis elegans Seven tm rece...    31   1.2  
Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z75554-10|CAA99956.1|  535|Caenorhabditis elegans Hypothetical p...    30   2.2  
U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF106577-13|AAC78186.1|  465|Caenorhabditis elegans Hypothetical...    28   6.7  

>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +1

Query: 376 GYNQKHTDDIRVKKSDII-MLIRASRVLGKFKNATSIKKY-LNILEVDK 516
           G+  K+ +D R KKSD+I   +RA  V G+F ++  +K +   I+EV+K
Sbjct: 104 GHTDKYPNDPRCKKSDVIHNKVRAVLVDGEFASSNCLKGHDWAIVEVEK 152


>AF067943-9|AAC17667.1|  348|Caenorhabditis elegans Seven tm
           receptor protein 114 protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = -1

Query: 596 IEIVHLFLVNIQPFKLHIHHVSNF*EYLSTSRILRYFFIEVAFLNFPKTREARISII 426
           +  ++ +LV   P KLH     NF  +LS    +   ++ +A++ F +  E R  ++
Sbjct: 110 VHFIYRYLVACHPTKLHYFRPKNFIFWLSGMLFIAGSWVAIAYVFFQEDLETRTDLV 166


>Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical
           protein F40D4.6 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 186 VVVEFGESIVNDNTGNRTNLTRLIDLIALTIYNM*TKALLEIFQQKSNLL 335
           ++++ G++   D T NR N   LID+  + I+N+     L +F Q  NLL
Sbjct: 199 LLLKVGKTKNKDVTMNRANRLALIDVAIIFIFNVLLSTFLTLFDQ-DNLL 247


>Z75554-10|CAA99956.1|  535|Caenorhabditis elegans Hypothetical
           protein ZC455.5a protein.
          Length = 535

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 465 KLPQNSRSSNQHNNIRFFNSDVIRMFLIVSI 373
           K+P+ + S    + I F+N D+I +FLI+SI
Sbjct: 480 KMPELTPSVQDMSIIEFYNLDIIFLFLIISI 510


>U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical
           protein T05B11.4 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -1

Query: 590 IVHLFLVNIQPFKLHIHHVSNF-----*EYLSTSRILRYFFIE 477
           I H  L  +Q F LHIHH S +      +Y+ T  +  ++ IE
Sbjct: 232 IEHFKLQGVQHFYLHIHHASEYDMRVINDYVRTGEVEVHYLIE 274


>AF106577-13|AAC78186.1|  465|Caenorhabditis elegans Hypothetical
           protein F46F5.7 protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
 Frame = -1

Query: 596 IEIV-HLFLVNIQPFKLHIHHVSNF-----*EYLSTSRILRYFFIE 477
           IE++ H  L  +Q F LHIHH S +      +Y+ T  +  ++ IE
Sbjct: 218 IELIEHYKLQGVQHFYLHIHHASEYDMAVINDYVRTGEVEVHYLIE 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,110,597
Number of Sequences: 27780
Number of extensions: 363642
Number of successful extensions: 764
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)