Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1916
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z69635-4|CAB54216.1|  336|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z69635-3|CAA93460.1|  342|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70266-4|CAA94206.3|  534|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
           protein F11E6.7 protein.
          Length = 1011

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -3

Query: 453 PHLSHET-FQEFRLQLYQITSESVEQ 379
           P  +HET  +E +LQL Q+TS+SV+Q
Sbjct: 10  PFGNHETNLKELKLQLEQVTSKSVKQ 35


>Z69635-4|CAB54216.1|  336|Caenorhabditis elegans Hypothetical
           protein F19B6.2b protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 469 VETTRAPPVARDLPGVPTAIV 407
           V T+ A PVA DLP +P  +V
Sbjct: 264 VSTSNAAPVANDLPAIPPVVV 284


>Z69635-3|CAA93460.1|  342|Caenorhabditis elegans Hypothetical
           protein F19B6.2a protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 469 VETTRAPPVARDLPGVPTAIV 407
           V T+ A PVA DLP +P  +V
Sbjct: 270 VSTSNAAPVANDLPAIPPVVV 290


>Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical
           protein C49F5.3 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 15  INQKIYLYVLFNLVVSKFFVSFLGTLGY 98
           I   IYL+ +FNL+++ FF   L  + +
Sbjct: 99  ITDTIYLFWIFNLLLASFFAGILSPINF 126


>Z70266-4|CAA94206.3|  534|Caenorhabditis elegans Hypothetical
           protein C40C9.2 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 12  LINQKIYLYVLFNLVVSKFFVSFLGTLGYT 101
           LI Q+  LY   NL++  F +S +  LG+T
Sbjct: 236 LIIQRRTLYYGLNLIIPSFLISLMTVLGFT 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,364,427
Number of Sequences: 27780
Number of extensions: 326557
Number of successful extensions: 809
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)