Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1910
         (476 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209438-1|BAD92675.1|  316|Homo sapiens PWP2 periodic tryptopha...    32   1.2  
X95263-1|CAA64560.1|  919|Homo sapiens PWP2 protein.                   30   4.8  
U56089-1|AAC50905.1|  919|Homo sapiens periodic tryptophan prote...    30   4.8  
U56085-1|AAC50904.1|  919|Homo sapiens periodic tryptophan prote...    30   4.8  
U53346-1|AAB08084.1|  919|Homo sapiens PWP2H protein protein.          30   4.8  
BC014988-1|AAH14988.1|  919|Homo sapiens PWP2 periodic tryptopha...    30   4.8  
BC013309-1|AAH13309.1|  919|Homo sapiens PWP2 periodic tryptopha...    30   4.8  
AP001753-1|BAA95553.1|  919|Homo sapiens periodic tryptophan pro...    30   4.8  
AB001517-2|BAA21137.1|  919|Homo sapiens PWP2 protein protein.         30   4.8  

>AB209438-1|BAD92675.1|  316|Homo sapiens PWP2 periodic tryptophan
           protein homolog protein.
          Length = 316

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 179 SPLLTV*REYYLGTWRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           SP+ T   +  +  W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 66  SPVCTGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 112


>X95263-1|CAA64560.1|  919|Homo sapiens PWP2 protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>U56089-1|AAC50905.1|  919|Homo sapiens periodic tryptophan protein
           2 protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>U56085-1|AAC50904.1|  919|Homo sapiens periodic tryptophan protein
           2 protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>U53346-1|AAB08084.1|  919|Homo sapiens PWP2H protein protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>BC014988-1|AAH14988.1|  919|Homo sapiens PWP2 periodic tryptophan
           protein homolog (yeast) protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>BC013309-1|AAH13309.1|  919|Homo sapiens PWP2 periodic tryptophan
           protein homolog (yeast) protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>AP001753-1|BAA95553.1|  919|Homo sapiens periodic tryptophan
           protein 2 homolog protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


>AB001517-2|BAA21137.1|  919|Homo sapiens PWP2 protein protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 221 WRSVFVFLPQVGGFNSFVALYLRP*NLYLKVGG 319
           W+S    L Q G FNS VAL   P   Y+  GG
Sbjct: 360 WQSESYVLKQQGHFNSMVALAYSPDGQYIVTGG 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,270,913
Number of Sequences: 237096
Number of extensions: 1371703
Number of successful extensions: 1646
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)