Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1909
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 61 5e-10
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 60 2e-09
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 60 2e-09
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 55 3e-08
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 54 6e-08
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 48 7e-06
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical p... 30 1.1
Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 29 2.0
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 2.0
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 2.0
AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical... 29 2.0
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 29 2.6
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 29 2.6
Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 29 3.4
U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical pr... 28 6.0
U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical pr... 27 7.9
AC024771-1|AAK70658.2| 315|Caenorhabditis elegans Serpentine re... 27 7.9
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 103 bits (246), Expect = 1e-22
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Frame = +2
Query: 122 NDPRYITLLSLIVLAV-TLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLA-----YS 283
NDP + +L+ V+ + T++ + S + +N VL +GL D GKT +F +L+ Y
Sbjct: 7 NDPTTLAVLATAVIGLLTVLLLVLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYP 66
Query: 284 QYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQ--HKSSAKGIVFVIDSINI 457
+T+TSM EN +K +I+D PG +RLR K E H S IVFV+DS
Sbjct: 67 TTTKTYTSMVENKITLRIKDKEKEIIDYPGNDRLRQKLIENHLHSRSLLRIVFVVDSAAF 126
Query: 458 QKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLSKGSQVIKGLLAK 610
K RDVAE YT+ + + + P+LI C+KQD L+K +VI+ L K
Sbjct: 127 SKNARDVAELFYTVALENV---DKVPILIACHKQDLSLAKTEKVIRNSLEK 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 61.3 bits (142), Expect = 5e-10
Identities = 36/127 (28%), Positives = 71/127 (55%)
Frame = +2
Query: 224 LLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 403
L++GL +GKT + +L ++ T ++ N+E TL + D+ GQ+++R ++
Sbjct: 21 LMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIR-ALWK 79
Query: 404 QHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLSKGS 583
+ + +VFV+DS +I++ I + E L+++L +P + + LL+ NKQD P ++
Sbjct: 80 YYFPNTTTLVFVVDSSDIER-IPEAKEELFSLLAEPELA--DSHLLVFANKQDMPNARSP 136
Query: 584 QVIKGLL 604
+ LL
Sbjct: 137 AELTQLL 143
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/136 (27%), Positives = 74/136 (54%)
Frame = +2
Query: 161 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITS 340
L ++ +F +F +R +L++GL +GKT + +L + T ++ N+E
Sbjct: 3 LTISSLFNRLFGKRQV---RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
Query: 341 NKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQ 520
N + + D+ GQ+++R + + + +G++FV+DS N ++ I + E L+ +L + ++
Sbjct: 60 NISFTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDKERIEESREELHKMLNEDELR 117
Query: 521 GNTTPLLILCNKQDQP 568
T LL+ NKQD P
Sbjct: 118 DAT--LLVFANKQDLP 131
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/136 (27%), Positives = 74/136 (54%)
Frame = +2
Query: 161 LAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITS 340
L ++ +F +F +R +L++GL +GKT + +L + T ++ N+E
Sbjct: 3 LTISSLFNRLFGKRQV---RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 59
Query: 341 NKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQ 520
N + + D+ GQ+++R + + + +G++FV+DS N ++ I + E L+ +L + ++
Sbjct: 60 NISFTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDKERIEESREELHKMLNEDELR 117
Query: 521 GNTTPLLILCNKQDQP 568
T LL+ NKQD P
Sbjct: 118 DAT--LLVFANKQDLP 131
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/116 (26%), Positives = 63/116 (54%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 400
+L++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLW 78
Query: 401 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 568
+ + +G++FV+DS N ++ + + E L +L + ++ LL+ NKQD P
Sbjct: 79 RHYFQNTQGLIFVVDS-NDRERVGEAREELMRMLAEDELR--DAVLLVFANKQDLP 131
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 54.4 bits (125), Expect = 6e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 167 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 343
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 344 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 523
T+K+ D+ GQ R R+ +E++ IVF++D+ + ++++ L +L P Q
Sbjct: 65 VTIKLWDIGGQPRFRS-MWERYCRGVNAIVFMVDAAD-EEKLEASRNELMQLLDKP--QL 120
Query: 524 NTTPLLILCNKQDQP 568
+ P+L+L NK+D P
Sbjct: 121 DAIPVLVLGNKKDLP 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 54.4 bits (125), Expect = 6e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 167 VTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEYITSN 343
V + WI S + + L+GL +SGKT +A Q+ + ++ N+ + N
Sbjct: 5 VNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGN 64
Query: 344 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 523
T+K+ D+ GQ R R+ +E++ IVF++D+ + ++++ L +L P Q
Sbjct: 65 VTIKLWDIGGQPRFRS-MWERYCRGVNAIVFMVDAAD-EEKLEASRNELMQLLDKP--QL 120
Query: 524 NTTPLLILCNKQDQP 568
+ P+L+L NK+D P
Sbjct: 121 DAIPVLVLGNKKDLP 135
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/114 (28%), Positives = 61/114 (53%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 400
+L++GL +GKT + RL + T ++ N+E+ N ++ DL GQ +R ++
Sbjct: 19 ILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIR-PYW 77
Query: 401 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 562
+ ++ I++V+DS + + + + L T+L + +QG L +L NKQD
Sbjct: 78 RCYYANTDAIIYVVDSAD-RDRVGISRQELATMLQEDELQG--AVLAVLANKQD 128
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 50.8 bits (116), Expect = 7e-07
Identities = 38/138 (27%), Positives = 67/138 (48%)
Frame = +2
Query: 155 IVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYI 334
+++A WWI ++Y ++++GL ++GKT + +T ++ N+EE
Sbjct: 3 LIMAKLFQSWWI-GKKY----KIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVS 57
Query: 335 TSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPI 514
N I D+ GQE LR K + + ++ VIDS + + I + E L+ +L
Sbjct: 58 YRNLDFVIWDIGGQESLR-KSWSTYYVQTDVVIVVIDSSDTTR-IPIMKEQLHNMLQHED 115
Query: 515 IQGNTTPLLILCNKQDQP 568
+ +L+L NKQD P
Sbjct: 116 LA--RAHILVLANKQDLP 131
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/119 (25%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 SVLLMGLSDSGKTLLFVRLAYSQYR--QTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 391
+++++GL +SGKT + +L + R Q ++ + + T N + D+ GQ + R+
Sbjct: 19 NIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRS 78
Query: 392 KFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 568
+ E + S++G++FV+DS + + + + + L ++ + P++IL NK D P
Sbjct: 79 TW-ESYFHSSQGVIFVLDSSD-RLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIP 135
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 47.6 bits (108), Expect = 7e-06
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = +2
Query: 209 LRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFT---SMKENIEEYITSNKTLKIVDLPGQE 379
+ + V+L+GL +GKT + RL Q ++ NIE N L D+ G
Sbjct: 368 IESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLP 427
Query: 380 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 559
+LR+ ++ + S+A+ I +VID +++ + E L ++ DP++ T P+++ N++
Sbjct: 428 KLRH-LWKHYYSNAQAIFYVIDGYAVERFSEAIKE-LNRVMSDPLV--GTCPVIVAVNRK 483
Query: 560 D 562
D
Sbjct: 484 D 484
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/114 (23%), Positives = 58/114 (50%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 400
+L++GL +GKT + +L Q T ++ N+E N + D+ GQ+++R +
Sbjct: 16 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR-PLW 74
Query: 401 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 562
+ + + ++FV+D+ + + + + L+ I+ D + +L+ NKQD
Sbjct: 75 RHYYTGTQALIFVMDAAD-RDRVDEARMELHRIINDR--EMKEAIILVFANKQD 125
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYIT-SNKTLKIVDLPGQERLRNKF 397
+LL+GL ++GKT + +L+ + + N++ + L + D+ GQ +R +
Sbjct: 20 ILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIR-PY 78
Query: 398 FEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLSK 577
+ + + ++FVIDS N +K ++ L +L + ++ P+LI NKQD +
Sbjct: 79 WSNYYENIDTLIFVIDS-NDKKRFDEMNIELGELLDEEKLR--KVPVLIFANKQDLVTAA 135
Query: 578 GSQVI 592
S+ I
Sbjct: 136 SSEEI 140
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/116 (25%), Positives = 61/116 (52%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 400
+L++GL ++GKT L + ++ +I+ + L + D+ GQ+ LR+ ++
Sbjct: 19 ILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRS-YW 77
Query: 401 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 568
+ + S +++V+DS + ++ + +E L +L + + G LL+L NK D P
Sbjct: 78 KNYFESTDALIWVVDSSD-RERLLQCSEELKKLLGEERLAG--ASLLVLANKSDLP 130
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/119 (24%), Positives = 59/119 (49%)
Frame = +2
Query: 212 RNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 391
+ ++ +GL ++GKT L L + Q ++ E+ + DL G + R
Sbjct: 21 KGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR- 79
Query: 392 KFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQP 568
+ ++ + + +VF+ID + ++ +++ L ++L D I + P+LIL NK D+P
Sbjct: 80 RVWKDYFPAVDAVVFLIDVADAER-MQESRVELESLLQDEQIA--SVPVLILGNKIDKP 135
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 35.9 bits (79), Expect = 0.023
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +2
Query: 221 VLLMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEY--ITSNKTLKIV--DLPGQERL 385
V+++G + GKT L R ++ + T ++ + E + N+ L++ D GQER
Sbjct: 103 VIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERY 162
Query: 386 RNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 562
R + + +VFV D + ++ D+A ++ ++ + P +++ NK D
Sbjct: 163 RQSIVAHYYRNVNAVVFVYD-VTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCD 220
>Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical
protein T06G6.3b protein.
Length = 483
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 29 YYFSDLVSVKRKNSTMESEVVKEKIHTEPILND 127
Y+F++ + ++++N+ +E EVV+EK + ND
Sbjct: 18 YFFAESLKLQQRNNLLEMEVVEEKAANTMLRND 50
>Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical
protein T06G6.3a protein.
Length = 511
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 29 YYFSDLVSVKRKNSTMESEVVKEKIHTEPILND 127
Y+F++ + ++++N+ +E EVV+EK + ND
Sbjct: 18 YFFAESLKLQQRNNLLEMEVVEEKAANTMLRND 50
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Frame = +2
Query: 212 RNSVLLMGLSDSGKT----LLFVR-LAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQ 376
+ VLLMG S SGKT ++F +A R T E+ N L + D GQ
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQ 63
Query: 377 ERLRNKFFEQHKSSA-KGI-----VFVIDSINIQKEIRDVAEYLYTIL 502
E F K K + VF ++S +K++R L +L
Sbjct: 64 ESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALL 111
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 59 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 229
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 230 MGLSD 244
+GL D
Sbjct: 342 IGLGD 346
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 59 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 229
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 230 MGLSD 244
+GL D
Sbjct: 342 IGLGD 346
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 59 RKNSTMESEVVKEKIHTEPILNDPRYITLLSLIV-LAVTLIF--WWIFSRRYTLRNSVLL 229
R NST E + +E+IH +P + T+ +I+ AV +F W F+ Y S+
Sbjct: 282 RLNSTPEDDEEEEEIHQDPPVLSTLIATVAWIILSAAVFCLFEDWTFFTSFYFCFISLTT 341
Query: 230 MGLSD 244
+GL D
Sbjct: 342 IGLGD 346
>AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical
protein Y102A5C.25 protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/74 (21%), Positives = 39/74 (52%)
Frame = -1
Query: 496 CV*VFCYISDFFLYIDRINHKHNSLSTTLVLFKEFISQSLLSRQIDYFQCFIRSYILFNI 317
C+ ++ + F++Y +++NH+ + ++++ I+ I Y+ FI + F +
Sbjct: 33 CIIIYTVVLPFYIYANKVNHERDK---EILIYP--ITNHFYKMVIVYYLIFIST--CFGV 85
Query: 316 FFHRSKSLSVLRVS 275
FF+ S S++ +S
Sbjct: 86 FFYPYLSDSIVLIS 99
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +2
Query: 362 DLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLL 541
D GQER R + + +VFV D + ++ D+A ++ ++ + P +
Sbjct: 2 DTAGQERYRQSIVAHYYRNVNAVVFVYD-VTCRESFNDLALWIKECEKHGLVGDSEVPRI 60
Query: 542 ILCNK 556
++ NK
Sbjct: 61 LIGNK 65
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 516 MIGSHKIVYRYSATSLISFCILIESITNTI 427
+IG + V+ Y +ISFCIL+ SI ++
Sbjct: 487 LIGQNMSVFEYYCLDIISFCILLLSIVISV 516
>Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical
protein T13F3.1 protein.
Length = 346
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 112 FCMNLFFNHFRFHCRVLSLHTH*VTKIICTL 20
FCM +F HF + + HT + K++C L
Sbjct: 104 FCMGIFGIHFFYRYLAIYGHTEMIRKLVCIL 134
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 128 PRYITLLSLIVLAVTLI---FWWIFSRRYTLRNSVLLMGLSDSGKTLLFV 268
P Y ++ I +AV + FWW +R+Y+L + L + L+DS LF+
Sbjct: 72 PLYYLSVAAITIAVHVCLREFWWDVNRKYSLGS--LFLYLADSTSINLFI 119
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 128 PRYITLLSLIVLAVTLI---FWWIFSRRYTLRNSVLLMGLSDSGKTLLFV 268
P Y ++ I +AV + FWW +R+Y+L + L + L+DS LF+
Sbjct: 72 PLYYLSVAAITIAVHVCLREFWWDVNRKYSLGS--LFLYLADSTSINLFI 119
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 462 FCILIESITNTIPLALLLCCSKNLFL 385
FC+ ++S+T+ + LL C SKN+++
Sbjct: 38 FCVHMQSVTSGLSEELLFCKSKNVYI 63
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 552 TNRTSHYQKEAKLSK 596
TNR SHYQK++KL K
Sbjct: 32 TNRCSHYQKQSKLQK 46
>U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical
protein F36D4.4 protein.
Length = 472
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 275 AYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 391
++SQ ++F + + N+ E N T +I P + LRN
Sbjct: 356 SFSQMNKSFANTRSNVREDENGNNTAEIEVTPNEPLLRN 394
>Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical
protein W08G11.5 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -2
Query: 462 FCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKV 295
FC ++ S+TN++ + L+L S S T F E+ Y+S+ F+E K+
Sbjct: 12 FCAIVSSLTNSVLIFLILTKSPPQLGSYKWLMLCTCF---FELAYASLDIFVEPKI 64
>U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.5 protein.
Length = 228
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/59 (18%), Positives = 29/59 (49%)
Frame = -2
Query: 498 IVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 322
++ R+ T ++SFC ++ + + + L C + ++ GR+ L +++ +S
Sbjct: 59 LIRRFLHTFVLSFCTKLQVVMRRLLIVLTTCAFTDAIGTMLVQGRADTIRTLRDIVRNS 117
>Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical
protein F21G4.1 protein.
Length = 640
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 247 WQDFAVCKTRLLSIQTDFYFYERKY*RVYNF**NIENSR 363
W F VC + L + F+F+ R Y +F +E+SR
Sbjct: 242 WLGFLVCGSAYLILAVPFFFFPRTYKHPDSFHLMLEHSR 280
>AC024771-1|AAK70658.2| 315|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 23 protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = -2
Query: 606 ASSPLITWLPFDNGWSCLLHNIRRGVVFP*MIGSHKIVYRYSATSLISFCILIESITNTI 427
ASS W ++ ++ I +VF ++ +K + + SL + L +SI +
Sbjct: 185 ASSTGSVWFVIAPLYAVMIGQIASRIVFELLLRKNKALRNSVSLSLSTRFNLDQSIRSLR 244
Query: 426 PLALLLCCSKNLFLSLSCPGRSTIFN 349
L LL+ C+ +F +LS + FN
Sbjct: 245 ALKLLVNCNTLVFATLSVVTTTLHFN 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,480,523
Number of Sequences: 27780
Number of extensions: 279260
Number of successful extensions: 918
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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