Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1907
(779 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 185 2e-48
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 185 2e-48
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 185 2e-48
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 185 2e-48
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 29 0.21
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 28 0.28
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.86
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 24 4.6
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 8.0
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 8.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 185 bits (450), Expect = 2e-48
Identities = 87/113 (76%), Positives = 91/113 (80%)
Frame = +1
Query: 385 EGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 564
EGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNTY
Sbjct: 4 EGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTY 63
Query: 565 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLNYPHP 723
SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTL P+P
Sbjct: 64 SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 40.3 bits (90), Expect = 7e-05
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 708 KLSTPTYGDLNHLVSLTMSGV 770
K+ P+YGDLNHLVSLTMSGV
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGV 132
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 185 bits (450), Expect = 2e-48
Identities = 87/113 (76%), Positives = 91/113 (80%)
Frame = +1
Query: 385 EGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 564
EGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNTY
Sbjct: 4 EGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTY 63
Query: 565 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLNYPHP 723
SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTL P+P
Sbjct: 64 SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 40.3 bits (90), Expect = 7e-05
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 708 KLSTPTYGDLNHLVSLTMSGV 770
K+ P+YGDLNHLVSLTMSGV
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGV 132
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 185 bits (450), Expect = 2e-48
Identities = 87/113 (76%), Positives = 91/113 (80%)
Frame = +1
Query: 385 EGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 564
EGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNTY
Sbjct: 4 EGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTY 63
Query: 565 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLNYPHP 723
SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTL P+P
Sbjct: 64 SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 40.3 bits (90), Expect = 7e-05
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 708 KLSTPTYGDLNHLVSLTMSGV 770
K+ P+YGDLNHLVSLTMSGV
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGV 132
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 185 bits (450), Expect = 2e-48
Identities = 87/113 (76%), Positives = 91/113 (80%)
Frame = +1
Query: 385 EGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 564
EGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIMNTY
Sbjct: 4 EGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTY 63
Query: 565 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLNYPHP 723
SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTL P+P
Sbjct: 64 SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 40.3 bits (90), Expect = 7e-05
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 708 KLSTPTYGDLNHLVSLTMSGV 770
K+ P+YGDLNHLVSLTMSGV
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGV 132
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 28.7 bits (61), Expect = 0.21
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 404 STSSAPSRVVSLGPVVTGAGLSEDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHVLAAG 225
ST++ P + G T + L ++ E + + + ++ G Q DG G AAG
Sbjct: 1257 STTTVPPPLSGTGQTTTNSNLLTSMMLMDESIIIQPQFQQLEINGKQPPNDGGGAATAAG 1316
Query: 224 G 222
G
Sbjct: 1317 G 1317
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 0.28
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 568 VVPSPKVSDTVVEPYNATLSVHQLVENTDETY 663
V P + S +P N T VHQ +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.86
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWE 128
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 24.2 bits (50), Expect = 4.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 653 TKPTVSTTRLSTISASAR*TIHTHIRRPEPPGVADHV 763
T T STT +T + + T T P P G +D +
Sbjct: 143 TTSTTSTTATTTTTTTTTTTTTTTTTTPNPVGESDQI 179
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.4 bits (48), Expect = 8.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 418 RLKLNRRAQHPPV*CPLAQLLPAPDCPKTKLSGRKICPKG 299
R K H CPL ++ DC +L KI KG
Sbjct: 193 RCKATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.4 bits (48), Expect = 8.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 418 RLKLNRRAQHPPV*CPLAQLLPAPDCPKTKLSGRKICPKG 299
R K H CPL ++ DC +L KI KG
Sbjct: 194 RCKATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,893
Number of Sequences: 2352
Number of extensions: 16417
Number of successful extensions: 52
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -