Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1906
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro...    31   0.78 
AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA...    31   0.78 
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro...    28   5.5  
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P...    28   5.5  

>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p protein.
          Length = 1266

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -2

Query: 398  FLPLKACCRIWICSSYRLSQNTTNFVRRRRFHRINFE---KCLVKS 270
            F P+  C  +W+C + R   N    V + + + INFE   KC +K+
Sbjct: 1010 FQPVNECINLWLCQARR---NIQRIVSQLQMNVINFECYGKCFIKA 1052


>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
            protein.
          Length = 1263

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -2

Query: 398  FLPLKACCRIWICSSYRLSQNTTNFVRRRRFHRINFE---KCLVKS 270
            F P+  C  +W+C + R   N    V + + + INFE   KC +K+
Sbjct: 1007 FQPVNECINLWLCQARR---NIQRIVSQLQMNVINFECYGKCFIKA 1049


>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
          Length = 1654

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = -2

Query: 380  CC--RIWICSSYRLSQNTTNFVRRRRFHRINFEKCLVKSIYLASIKKH-SSETYQMILYL 210
            CC  R+W   +       + FVR    + +   K L K ++ +S+ +  S +  Q + Y+
Sbjct: 943  CCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQGMCYV 1002

Query: 209  QNDKLFP*NRP 177
             N K +   RP
Sbjct: 1003 MNIKDYIKMRP 1013


>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
            protein.
          Length = 1654

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = -2

Query: 380  CC--RIWICSSYRLSQNTTNFVRRRRFHRINFEKCLVKSIYLASIKKH-SSETYQMILYL 210
            CC  R+W   +       + FVR    + +   K L K ++ +S+ +  S +  Q + Y+
Sbjct: 943  CCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQGMCYV 1002

Query: 209  QNDKLFP*NRP 177
             N K +   RP
Sbjct: 1003 MNIKDYIKMRP 1013


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,724,042
Number of Sequences: 53049
Number of extensions: 292810
Number of successful extensions: 457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)