Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1905
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   2.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.7  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.7  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   6.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   6.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.2  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +2

Query: 266 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAP--DRSYR 439
           PA    D+      G+     G S     G     + D DE H  GRK   AP   R   
Sbjct: 616 PAGYREDTTGSYKYGKLSSSGGASSTTHSGAPSRSQSDEDEQHSVGRK-GLAPLIQRGEG 674

Query: 440 SGEGKEQIP 466
           S EGK   P
Sbjct: 675 SFEGKAMPP 683


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 501 KHTETCEKNPLPTKDVIEQEKS 566
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 593 TRKCISLVSPYFNIDVSQIDLRRPLQVLFLFLYN 694
           TR C+  +     +D S   + R +Q L ++LYN
Sbjct: 133 TRLCLPQIFNNILMDFSVEQINRSIQELMIYLYN 166


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = -1

Query: 324 RQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQ---QTEAQSFHWCRRHGD 154
           + ++ P    S    C      +  R  R++     Q ++     QT +Q+ HW + HGD
Sbjct: 177 KDKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGD 236


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 203 RRCH*EDPEVFIRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPL 352
           R CH E   +   R R +  + A     + +E    QR    GE PPEP+
Sbjct: 63  RTCHCEKCCLTAERQRVMALQTALRRAQTQDE----QRALNEGEVPPEPV 108


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 203 RRCH*EDPEVFIRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPL 352
           R CH E   +   R R +  + A     + +E    QR    GE PPEP+
Sbjct: 63  RTCHCEKCCLTAERQRVMALQTALRRAQTQDE----QRALNEGEVPPEPV 108


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 515 RLRVLQLSGIEVLDAVQEFVLFLLRFDS 432
           R+++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,627
Number of Sequences: 2352
Number of extensions: 15728
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)