Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1905
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 79 3e-15
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 33 0.23
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 30 2.2
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 2.9
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 2.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 2.9
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 6.6
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 6.6
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 8.8
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 8.8
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 79.4 bits (187), Expect = 3e-15
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +3
Query: 87 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 263
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 264 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 443
++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115
Query: 444 XXXXNKFLNGIENFDPTKLKHTET 515
K L +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = +3
Query: 267 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 446
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 447 XXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 566
+ + I NF LK TET EKN LP+ + +EK+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +3
Query: 318 VVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTK 497
V K +Q L V + ++K T EKN L + ++ IE+FD TK
Sbjct: 4 VTELPKMNQELAGAVR--EGLELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTK 61
Query: 498 LKHTETCEKNPLPTKDVIEQEK 563
L T EK LP+ D I+QEK
Sbjct: 62 LHSTPVKEKIVLPSADDIKQEK 83
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 33.1 bits (72), Expect = 0.23
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 293 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 472
+ P +RR + E + RSR R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 473 HRELRSH*AEAHGDVR--KEPAPHKGRH-*AREI 565
E + E G++R PAP K R ARE+
Sbjct: 66 KEEKQEQ-EEEDGEIRDTTPPAPEKPRQLTAREL 98
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +2
Query: 263 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSY- 436
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 437 RSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH 550
R G+ E E ++ R HG+ +EP+ + H
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEPSREREHH 232
Score = 27.9 bits (59), Expect = 8.8
Identities = 28/120 (23%), Positives = 46/120 (38%)
Frame = +2
Query: 239 RRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKEST 418
RR ++ + S + +S +R S S GR R+ D D GR++
Sbjct: 461 RRVQQQNASTPASDNSSSHDDSSERRHSTSDHSKENERGRKEDGREKDDFREDHGRED-- 518
Query: 419 APDRSYRSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLNHYFITVTR 598
GK ++PE+ E H ++HG P ++G +E F+T R
Sbjct: 519 ---------HGKSEVPEK-VEHEQHPPQSHGSPHPGP-QYQGPPPRKEFPTPGRFVTNIR 567
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 281 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 454
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 455 EQIPERHRELRS 490
+ PER RS
Sbjct: 292 NERPERPSRWRS 303
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/94 (27%), Positives = 38/94 (40%)
Frame = +2
Query: 260 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 439
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 440 SGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 541
+EQ ER R + E + +E A +
Sbjct: 382 EQNRREQQRERERAEQERRREREKEREQEKAKER 415
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +2
Query: 266 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPD--RSYR 439
P + E PA RR R S + + T DS + DD S++ D S
Sbjct: 58 PRSSELPISESPAPRARRARKQRSKRKSVKPPNTSSDDSSDDSDDSSSSSSSDDSVSSKS 117
Query: 440 SGEGKEQIPERHRELRSH*AEAHG 511
S + P R R+ + + HG
Sbjct: 118 STNSSDSSPCRCRDGLAEWEQRHG 141
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 443 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLNHY 580
G+ + Q P+ + RS + GD+ P P A EI L+HY
Sbjct: 320 GQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIELHHY 365
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 272 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 412
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 327 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 202
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 327 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 202
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 306 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 154
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 306 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 154
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 306 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 154
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 306 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 154
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 195 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 374
S K + L +E S H + ++KN D ++ E Q L+G F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426
Query: 375 KTQMKH 392
+MK+
Sbjct: 427 SPEMKN 432
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 221 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 129
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/80 (30%), Positives = 32/80 (40%)
Frame = +2
Query: 263 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 442
EP S EP G R CR + R R R+ S+E H + + A D Y+
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRK--RLRRARETSEETH---TRLAKAAD--YKR 102
Query: 443 GEGKEQIPERHRELRSH*AE 502
E+ E +RE AE
Sbjct: 103 KRCSEETEEEYRERLKRQAE 122
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 27.9 bits (59), Expect = 8.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +2
Query: 281 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 460
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 461 IPERHRELRSH*AEAHGDVRKEPAP 535
P R RE S ++ +EPAP
Sbjct: 124 SPRRRRERSSERKQS-----EEPAP 143
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 27.9 bits (59), Expect = 8.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +2
Query: 281 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 460
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 461 IPERHRELRSH*AEAHGDVRKEPAP 535
P R RE S ++ +EPAP
Sbjct: 124 SPRRRRERSSERKQS-----EEPAP 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,455,027
Number of Sequences: 27780
Number of extensions: 369587
Number of successful extensions: 1427
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -